T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 11163..35139
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS996_RS00050 (pSH146_65_15) | 7021..7425 | + | 405 | WP_258404812 | CaiF/GrlA family transcriptional regulator | - |
| HS996_RS00420 (pSH146_65_16) | 7601..7735 | + | 135 | WP_001358486 | DUF1187 family protein | - |
| HS996_RS00060 (pSH146_65_17) | 7728..7904 | + | 177 | WP_000753050 | hypothetical protein | - |
| HS996_RS00065 (pSH146_65_18) | 7931..8884 | + | 954 | WP_072089442 | SPFH domain-containing protein | - |
| HS996_RS00070 (pSH146_65_20) | 9258..9701 | + | 444 | WP_000964331 | NfeD family protein | - |
| HS996_RS00075 (pSH146_65_21) | 9705..9875 | + | 171 | WP_000550720 | hypothetical protein | - |
| HS996_RS00080 (pSH146_65_22) | 9886..10332 | + | 447 | WP_001243164 | hypothetical protein | - |
| HS996_RS00085 (pSH146_65_24) | 10552..10905 | + | 354 | WP_023154634 | hypothetical protein | - |
| HS996_RS00090 (pSH146_65_25) | 11163..12149 | + | 987 | WP_001028544 | type IV secretion system protein | virB6 |
| HS996_RS00095 (pSH146_65_26) | 12155..12802 | + | 648 | WP_000653673 | type IV secretion system protein | - |
| HS996_RS00100 (pSH146_65_27) | 12806..13042 | + | 237 | WP_000750964 | EexN family lipoprotein | - |
| HS996_RS00425 (pSH146_65_28) | 13120..13464 | - | 345 | WP_015059534 | hypothetical protein | - |
| HS996_RS00430 (pSH146_65_29) | 13497..13910 | - | 414 | WP_015059535 | DUF5710 domain-containing protein | - |
| HS996_RS00110 (pSH146_65_30) | 13958..14593 | + | 636 | WP_015059536 | hypothetical protein | - |
| HS996_RS00115 (pSH146_65_31) | 14693..14945 | + | 253 | Protein_25 | plasmid stabilization protein | - |
| HS996_RS00120 (pSH146_65_32) | 14935..15216 | + | 282 | WP_000638823 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HS996_RS00125 (pSH146_65_33) | 15284..15583 | + | 300 | WP_000835764 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HS996_RS00130 (pSH146_65_34) | 15586..16821 | + | 1236 | WP_015059538 | TcpQ domain-containing protein | - |
| HS996_RS00135 (pSH146_65_35) | 16827..17264 | + | 438 | WP_000539665 | type IV pilus biogenesis protein PilM | - |
| HS996_RS00140 (pSH146_65_36) | 17383..17781 | + | 399 | WP_001153665 | hypothetical protein | - |
| HS996_RS00145 (pSH146_65_37) | 17802..18386 | + | 585 | WP_001177113 | lytic transglycosylase domain-containing protein | virB1 |
| HS996_RS00435 (pSH146_65_38) | 18386..18676 | + | 291 | WP_000865479 | conjugal transfer protein | - |
| HS996_RS00155 (pSH146_65_39) | 18747..19067 | + | 321 | WP_000362080 | VirB3 family type IV secretion system protein | virB3 |
| HS996_RS00160 (pSH146_65_40) | 19073..21430 | + | 2358 | WP_000548955 | VirB4 family type IV secretion system protein | virb4 |
| HS996_RS00165 (pSH146_65_42) | 21596..22330 | + | 735 | WP_000432282 | virB8 family protein | virB8 |
| HS996_RS00170 (pSH146_65_43) | 22396..23097 | + | 702 | WP_000274524 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HS996_RS00175 (pSH146_65_44) | 23087..24226 | + | 1140 | WP_000790640 | TrbI/VirB10 family protein | virB10 |
| HS996_RS00180 (pSH146_65_45) | 24245..25300 | + | 1056 | WP_001059977 | P-type DNA transfer ATPase VirB11 | virB11 |
| HS996_RS00185 (pSH146_65_46) | 25316..27274 | + | 1959 | WP_015059539 | type IV secretory system conjugative DNA transfer family protein | - |
| HS996_RS00190 (pSH146_65_47) | 27321..27851 | + | 531 | WP_001220542 | sigma 54-interacting transcriptional regulator | virb4 |
| HS996_RS00195 (pSH146_65_48) | 27844..29487 | + | 1644 | WP_001035592 | PilN family type IVB pilus formation outer membrane protein | - |
| HS996_RS00200 (pSH146_65_49) | 29526..30848 | + | 1323 | WP_000454142 | type 4b pilus protein PilO2 | - |
| HS996_RS00205 (pSH146_65_50) | 30832..31326 | + | 495 | WP_000912553 | type IV pilus biogenesis protein PilP | - |
| HS996_RS00210 (pSH146_65_51) | 31351..32889 | + | 1539 | WP_000466225 | GspE/PulE family protein | virB11 |
| HS996_RS00215 (pSH146_65_52) | 32880..33989 | + | 1110 | WP_000974903 | type II secretion system F family protein | - |
| HS996_RS00220 (pSH146_65_53) | 34034..34591 | + | 558 | WP_000095048 | type 4 pilus major pilin | - |
| HS996_RS00225 (pSH146_65_54) | 34657..35139 | + | 483 | WP_001258095 | lytic transglycosylase domain-containing protein | virB1 |
| HS996_RS00230 (pSH146_65_55) | 35143..35778 | + | 636 | WP_000934977 | A24 family peptidase | - |
| HS996_RS00235 (pSH146_65_56) | 35791..37077 | + | 1287 | WP_015059540 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HS996_RS00465 | 37738..37972 | - | 235 | Protein_50 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HS996_RS00470 | 38230..38352 | - | 123 | Protein_51 | shufflon protein C' | - |
| HS996_RS00240 (pSH146_65_58) | 38533..39795 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |