T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 33504..58762
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC084_RS24395 (RC084_24390) | 33504..35684 | - | 2181 | WP_063078088 | type IV conjugative transfer system coupling protein TraD | virb4 |
| RC084_RS24400 (RC084_24395) | 35937..36668 | - | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| RC084_RS24405 (RC084_24400) | 36700..37203 | - | 504 | WP_000605510 | hypothetical protein | - |
| RC084_RS24410 (RC084_24405) | 37218..40040 | - | 2823 | WP_001007048 | conjugal transfer mating-pair stabilization protein TraG | traG |
| RC084_RS24415 (RC084_24410) | 40037..41413 | - | 1377 | WP_000982842 | conjugal transfer pilus assembly protein TraH | traH |
| RC084_RS24420 (RC084_24415) | 41410..41772 | - | 363 | WP_001443292 | P-type conjugative transfer protein TrbJ | - |
| RC084_RS24425 (RC084_24420) | 41702..42247 | - | 546 | WP_000052613 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| RC084_RS24430 (RC084_24425) | 42234..42515 | - | 282 | WP_039002206 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RC084_RS24435 (RC084_24430) | 42631..43374 | - | 744 | WP_039002205 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| RC084_RS24440 (RC084_24435) | 43367..43627 | - | 261 | WP_000864348 | conjugal transfer protein TrbE | - |
| RC084_RS24445 (RC084_24440) | 43654..45462 | - | 1809 | WP_000821844 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| RC084_RS24450 (RC084_24445) | 45459..46097 | - | 639 | WP_000777691 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| RC084_RS24455 (RC084_24450) | 46106..47098 | - | 993 | WP_023148235 | conjugal transfer pilus assembly protein TraU | traU |
| RC084_RS24460 (RC084_24455) | 47095..47727 | - | 633 | WP_001749440 | type-F conjugative transfer system protein TraW | traW |
| RC084_RS24465 (RC084_24460) | 47724..48110 | - | 387 | WP_039002198 | type-F conjugative transfer system protein TrbI | - |
| RC084_RS24470 (RC084_24465) | 48107..50734 | - | 2628 | WP_001064265 | type IV secretion system protein TraC | virb4 |
| RC084_RS24475 (RC084_24470) | 50894..51115 | - | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| RC084_RS24480 (RC084_24475) | 51250..51765 | - | 516 | WP_000724019 | type IV conjugative transfer system lipoprotein TraV | traV |
| RC084_RS24485 (RC084_24480) | 51762..52082 | - | 321 | WP_001057285 | conjugal transfer protein TrbD | - |
| RC084_RS24490 (RC084_24485) | 52069..52656 | - | 588 | WP_000002772 | conjugal transfer pilus-stabilizing protein TraP | - |
| RC084_RS24495 (RC084_24490) | 52646..54073 | - | 1428 | WP_000146690 | F-type conjugal transfer pilus assembly protein TraB | traB |
| RC084_RS24500 (RC084_24495) | 54073..54801 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| RC084_RS24505 (RC084_24500) | 54788..55354 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| RC084_RS24510 (RC084_24505) | 55376..55687 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| RC084_RS24515 (RC084_24510) | 55692..56054 | - | 363 | WP_000994784 | type IV conjugative transfer system pilin TraA | - |
| RC084_RS24520 (RC084_24515) | 56087..56482 | - | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| RC084_RS24525 (RC084_24520) | 56581..57270 | - | 690 | WP_039002187 | conjugal transfer transcriptional regulator TraJ | - |
| RC084_RS24530 (RC084_24525) | 57457..57840 | - | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| RC084_RS24535 (RC084_24530) | 58172..58762 | + | 591 | WP_001376243 | transglycosylase SLT domain-containing protein | virB1 |
| RC084_RS24540 (RC084_24535) | 59059..59880 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| RC084_RS24545 (RC084_24540) | 60002..60289 | - | 288 | WP_000107535 | hypothetical protein | - |
| RC084_RS24550 (RC084_24545) | 60314..60520 | - | 207 | WP_000547968 | hypothetical protein | - |
| RC084_RS24555 (RC084_24550) | 60590..60763 | + | 174 | Protein_68 | hypothetical protein | - |
| RC084_RS24560 (RC084_24555) | 60761..60991 | - | 231 | WP_001426396 | hypothetical protein | - |
| RC084_RS24565 (RC084_24560) | 61211..61336 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| RC084_RS24570 (RC084_24565) | 61278..61427 | - | 150 | Protein_71 | plasmid maintenance protein Mok | - |
| RC084_RS24575 (RC084_24570) | 61649..62368 | - | 720 | WP_001276232 | plasmid SOS inhibition protein A | - |
| RC084_RS24580 (RC084_24575) | 62365..62799 | - | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |