T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 46596..71742
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RCR42_RS25810 (RCR42_25810) | 42627..42860 | - | 234 | WP_001191890 | hypothetical protein | - |
| RCR42_RS25815 (RCR42_25815) | 42842..43459 | - | 618 | WP_001249395 | hypothetical protein | - |
| RCR42_RS25820 (RCR42_25820) | 43627..46599 | + | 2973 | WP_308982204 | MobH family relaxase | - |
| RCR42_RS25825 (RCR42_25825) | 46596..48461 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| RCR42_RS25830 (RCR42_25830) | 48511..49056 | + | 546 | WP_247750980 | hypothetical protein | - |
| RCR42_RS25835 (RCR42_25835) | 49013..49642 | + | 630 | WP_088212662 | DUF4400 domain-containing protein | tfc7 |
| RCR42_RS25840 (RCR42_25840) | 49652..50098 | + | 447 | WP_000122507 | hypothetical protein | - |
| RCR42_RS25845 (RCR42_25845) | 50108..50485 | + | 378 | WP_088212663 | hypothetical protein | - |
| RCR42_RS25850 (RCR42_25850) | 50485..51147 | + | 663 | WP_308982208 | hypothetical protein | - |
| RCR42_RS25855 (RCR42_25855) | 51483..51848 | + | 366 | WP_001052531 | hypothetical protein | - |
| RCR42_RS25860 (RCR42_25860) | 51993..52274 | + | 282 | WP_088212665 | type IV conjugative transfer system protein TraL | traL |
| RCR42_RS25865 (RCR42_25865) | 52271..52897 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| RCR42_RS25870 (RCR42_25870) | 52881..53798 | + | 918 | WP_088212666 | type-F conjugative transfer system secretin TraK | traK |
| RCR42_RS25875 (RCR42_25875) | 53798..55111 | + | 1314 | WP_308982260 | TrbI/VirB10 family protein | traB |
| RCR42_RS25880 (RCR42_25880) | 55108..55686 | + | 579 | WP_088212668 | type IV conjugative transfer system lipoprotein TraV | traV |
| RCR42_RS25885 (RCR42_25885) | 55690..56082 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| RCR42_RS25890 (RCR42_25890) | 56283..61769 | + | 5487 | WP_308982212 | Ig-like domain-containing protein | - |
| RCR42_RS25895 (RCR42_25895) | 61918..62625 | + | 708 | WP_001259346 | DsbC family protein | - |
| RCR42_RS25900 (RCR42_25900) | 62622..65069 | + | 2448 | WP_088212670 | type IV secretion system protein TraC | virb4 |
| RCR42_RS25905 (RCR42_25905) | 65084..65401 | + | 318 | WP_000351984 | hypothetical protein | - |
| RCR42_RS25910 (RCR42_25910) | 65398..65928 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| RCR42_RS25915 (RCR42_25915) | 65891..67156 | + | 1266 | WP_088212671 | TrbC family F-type conjugative pilus assembly protein | traW |
| RCR42_RS25920 (RCR42_25920) | 67153..67824 | + | 672 | WP_088212672 | EAL domain-containing protein | - |
| RCR42_RS25925 (RCR42_25925) | 67824..68828 | + | 1005 | WP_005507569 | TraU family protein | traU |
| RCR42_RS25930 (RCR42_25930) | 68944..71742 | + | 2799 | WP_204260578 | conjugal transfer mating pair stabilization protein TraN | traN |
| RCR42_RS25935 (RCR42_25935) | 71782..72642 | - | 861 | WP_088212674 | hypothetical protein | - |
| RCR42_RS25940 (RCR42_25940) | 72765..73406 | - | 642 | WP_088212675 | hypothetical protein | - |
| RCR42_RS25945 (RCR42_25945) | 73702..74022 | + | 321 | WP_163440224 | hypothetical protein | - |
| RCR42_RS25950 (RCR42_25950) | 74326..74511 | + | 186 | WP_001186916 | hypothetical protein | - |
| RCR42_RS25955 (RCR42_25955) | 74731..75699 | + | 969 | WP_113620223 | AAA family ATPase | - |
| RCR42_RS25960 (RCR42_25960) | 75710..76615 | + | 906 | WP_308982217 | hypothetical protein | - |