T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 49967..93747
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I0P42_RS24730 (I0P42_24580) | 45029..46096 | + | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |
| I0P42_RS24735 (I0P42_24585) | 46096..46533 | + | 438 | WP_000539806 | type IV pilus biogenesis protein PilM | - |
| I0P42_RS24740 (I0P42_24590) | 46547..48229 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| I0P42_RS24745 (I0P42_24595) | 48222..49517 | + | 1296 | WP_023518855 | type 4b pilus protein PilO2 | - |
| I0P42_RS24750 (I0P42_24600) | 49504..49956 | + | 453 | WP_001247337 | type IV pilus biogenesis protein PilP | - |
| I0P42_RS24755 (I0P42_24605) | 49967..51520 | + | 1554 | WP_023518854 | GspE/PulE family protein | virB11 |
| I0P42_RS24760 (I0P42_24610) | 51533..52618 | + | 1086 | WP_001208802 | type II secretion system F family protein | - |
| I0P42_RS24765 (I0P42_24615) | 52635..53249 | + | 615 | WP_000908227 | type 4 pilus major pilin | - |
| I0P42_RS24770 (I0P42_24620) | 53259..53819 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| I0P42_RS24775 (I0P42_24625) | 53804..54460 | + | 657 | WP_001401940 | A24 family peptidase | - |
| I0P42_RS24780 (I0P42_24630) | 54460..55752 | + | 1293 | WP_001619585 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| I0P42_RS24785 (I0P42_24635) | 55749..55997 | - | 249 | WP_001349157 | hypothetical protein | - |
| I0P42_RS24790 (I0P42_24640) | 57486..58640 | + | 1155 | WP_001139955 | tyrosine-type recombinase/integrase | - |
| I0P42_RS24795 (I0P42_24645) | 58791..59615 | + | 825 | WP_023518851 | conjugal transfer protein TraE | traE |
| I0P42_RS24800 (I0P42_24650) | 59701..60903 | + | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| I0P42_RS24805 (I0P42_24655) | 60963..61547 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| I0P42_RS24810 (I0P42_24660) | 61942..62400 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| I0P42_RS24815 (I0P42_24665) | 62397..63215 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| I0P42_RS24820 (I0P42_24670) | 63212..64360 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| I0P42_RS24825 (I0P42_24675) | 64357..64647 | + | 291 | WP_001299214 | hypothetical protein | traK |
| I0P42_RS24830 (I0P42_24680) | 64662..65213 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| I0P42_RS24835 (I0P42_24685) | 65303..69070 | + | 3768 | WP_023518849 | LPD7 domain-containing protein | - |
| I0P42_RS24840 (I0P42_24690) | 69088..69435 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| I0P42_RS24845 (I0P42_24695) | 69432..70124 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| I0P42_RS24850 (I0P42_24700) | 70135..71118 | + | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| I0P42_RS24855 (I0P42_24705) | 71121..72410 | + | 1290 | WP_011264042 | conjugal transfer protein TraO | traO |
| I0P42_RS24860 (I0P42_24710) | 72410..73114 | + | 705 | WP_001493811 | IncI1-type conjugal transfer protein TraP | traP |
| I0P42_RS24865 (I0P42_24715) | 73114..73641 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| I0P42_RS24870 (I0P42_24720) | 73692..74096 | + | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| I0P42_RS24875 (I0P42_24725) | 74160..74348 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| I0P42_RS24880 (I0P42_24730) | 74332..75132 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| I0P42_RS24885 (I0P42_24735) | 75222..78266 | + | 3045 | WP_023518848 | IncI1-type conjugal transfer protein TraU | traU |
| I0P42_RS24890 (I0P42_24740) | 78266..78880 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| I0P42_RS24895 (I0P42_24745) | 78847..80049 | + | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| I0P42_RS24900 (I0P42_24750) | 80078..80662 | + | 585 | WP_001746157 | IncI1-type conjugal transfer protein TraX | - |
| I0P42_RS24905 (I0P42_24755) | 80759..82927 | + | 2169 | WP_023518847 | DotA/TraY family protein | traY |
| I0P42_RS24910 (I0P42_24760) | 82998..83660 | + | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| I0P42_RS24915 (I0P42_24765) | 83732..83941 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| I0P42_RS24920 (I0P42_24770) | 84333..84509 | + | 177 | WP_001054897 | hypothetical protein | - |
| I0P42_RS24925 | 84574..84669 | - | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| I0P42_RS24930 (I0P42_24780) | 85170..85421 | + | 252 | WP_001291964 | hypothetical protein | - |
| I0P42_RS24935 (I0P42_24785) | 85493..85645 | - | 153 | WP_001387489 | Hok/Gef family protein | - |
| I0P42_RS24940 (I0P42_24790) | 85966..86340 | + | 375 | WP_223349261 | hypothetical protein | - |
| I0P42_RS24945 (I0P42_24795) | 86493..87755 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| I0P42_RS24950 (I0P42_24800) | 88079..89224 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| I0P42_RS24955 (I0P42_24805) | 89318..89851 | + | 534 | WP_001221666 | lipocalin family protein | - |
| I0P42_RS24960 (I0P42_24810) | 89848..90165 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| I0P42_RS24965 (I0P42_24815) | 90361..91143 | + | 783 | WP_023063753 | protein FinQ | - |
| I0P42_RS24970 (I0P42_24820) | 91450..92658 | + | 1209 | WP_011264049 | IncI1-type conjugal transfer protein TrbA | trbA |
| I0P42_RS24975 (I0P42_24825) | 92677..93747 | + | 1071 | WP_011264050 | IncI1-type conjugal transfer protein TrbB | trbB |
| I0P42_RS24980 (I0P42_24830) | 93740..96031 | + | 2292 | WP_011264051 | F-type conjugative transfer protein TrbC | - |