T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 87104..112295
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDZ90_RS19740 | 82233..82766 | - | 534 | WP_227543304 | hypothetical protein | - |
| FDZ90_RS19745 | 82709..83140 | - | 432 | WP_228717829 | hypothetical protein | - |
| FDZ90_RS00540 (FDZ90_00575) | 83144..84118 | - | 975 | WP_180821247 | AAA family ATPase | - |
| FDZ90_RS00545 (FDZ90_00580) | 84338..84523 | - | 186 | WP_001186917 | hypothetical protein | - |
| FDZ90_RS00550 (FDZ90_00585) | 84827..85147 | - | 321 | WP_000547566 | hypothetical protein | - |
| FDZ90_RS00555 (FDZ90_00590) | 85441..86082 | + | 642 | WP_000796664 | hypothetical protein | - |
| FDZ90_RS00560 (FDZ90_00595) | 86205..87065 | + | 861 | WP_000709517 | hypothetical protein | - |
| FDZ90_RS00565 (FDZ90_00600) | 87104..89902 | - | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| FDZ90_RS00570 (FDZ90_00605) | 90018..91022 | - | 1005 | WP_043940352 | TraU family protein | traU |
| FDZ90_RS00575 (FDZ90_00610) | 91022..91693 | - | 672 | WP_001337754 | EAL domain-containing protein | - |
| FDZ90_RS00580 (FDZ90_00615) | 91690..92955 | - | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| FDZ90_RS00585 (FDZ90_00620) | 92918..93448 | - | 531 | WP_001010738 | S26 family signal peptidase | - |
| FDZ90_RS00590 (FDZ90_00625) | 93445..93762 | - | 318 | WP_000351984 | hypothetical protein | - |
| FDZ90_RS00595 (FDZ90_00630) | 93777..96224 | - | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| FDZ90_RS00600 (FDZ90_00635) | 96221..96928 | - | 708 | WP_001259347 | DsbC family protein | - |
| FDZ90_RS00605 (FDZ90_00640) | 97077..102608 | - | 5532 | WP_000606833 | Ig-like domain-containing protein | - |
| FDZ90_RS00610 (FDZ90_00645) | 102809..103201 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| FDZ90_RS00615 (FDZ90_00650) | 103205..103783 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| FDZ90_RS00620 (FDZ90_00655) | 103780..105093 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| FDZ90_RS00625 (FDZ90_00660) | 105093..106010 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| FDZ90_RS00630 (FDZ90_00665) | 105994..106620 | - | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| FDZ90_RS00635 (FDZ90_00670) | 106617..106898 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| FDZ90_RS00640 (FDZ90_00675) | 107043..107408 | - | 366 | WP_001052531 | hypothetical protein | - |
| FDZ90_RS00645 | 107420..107563 | - | 144 | WP_001275801 | hypothetical protein | - |
| FDZ90_RS00650 (FDZ90_00680) | 107744..108406 | - | 663 | WP_001231463 | hypothetical protein | - |
| FDZ90_RS00655 (FDZ90_00685) | 108406..108783 | - | 378 | WP_000869261 | hypothetical protein | - |
| FDZ90_RS00660 (FDZ90_00690) | 108793..109239 | - | 447 | WP_000122506 | hypothetical protein | - |
| FDZ90_RS00665 (FDZ90_00695) | 109249..109878 | - | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| FDZ90_RS00670 (FDZ90_00700) | 109835..110380 | - | 546 | WP_000228720 | hypothetical protein | - |
| FDZ90_RS00675 (FDZ90_00705) | 110430..112295 | - | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| FDZ90_RS00680 (FDZ90_00710) | 112292..115270 | - | 2979 | WP_001337757 | MobH family relaxase | - |
| FDZ90_RS00685 (FDZ90_00715) | 115438..116055 | + | 618 | WP_001249396 | hypothetical protein | - |
| FDZ90_RS00690 (FDZ90_00720) | 116037..116270 | + | 234 | WP_001191892 | hypothetical protein | - |