T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 30975..54501
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RCO50_RS22830 (RCO50_22830) | 28729..28950 | + | 222 | Protein_33 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| RCO50_RS22835 (RCO50_22835) | 28947..30323 | - | 1377 | WP_000750519 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| RCO50_RS22840 (RCO50_22840) | 30336..30971 | - | 636 | WP_000934978 | A24 family peptidase | - |
| RCO50_RS22845 (RCO50_22845) | 30975..31457 | - | 483 | WP_001258095 | lytic transglycosylase domain-containing protein | virB1 |
| RCO50_RS22850 (RCO50_22850) | 31523..32080 | - | 558 | WP_000095048 | type 4 pilus major pilin | - |
| RCO50_RS22855 (RCO50_22855) | 32125..33234 | - | 1110 | WP_000974903 | type II secretion system F family protein | - |
| RCO50_RS22860 (RCO50_22860) | 33225..34778 | - | 1554 | WP_000466228 | GspE/PulE family protein | virB11 |
| RCO50_RS22865 (RCO50_22865) | 34803..35297 | - | 495 | WP_000912555 | type IV pilus biogenesis protein PilP | - |
| RCO50_RS22870 (RCO50_22870) | 35281..36603 | - | 1323 | WP_010895889 | type 4b pilus protein PilO2 | - |
| RCO50_RS22875 (RCO50_22875) | 36642..38285 | - | 1644 | WP_001035589 | PilN family type IVB pilus formation outer membrane protein | - |
| RCO50_RS22880 (RCO50_22880) | 38278..38796 | - | 519 | WP_069057551 | sigma 54-interacting transcriptional regulator | virb4 |
| RCO50_RS22885 (RCO50_22885) | 38843..40801 | - | 1959 | WP_000338974 | type IV secretory system conjugative DNA transfer family protein | - |
| RCO50_RS22890 (RCO50_22890) | 40817..41872 | - | 1056 | WP_001059977 | P-type DNA transfer ATPase VirB11 | virB11 |
| RCO50_RS22895 (RCO50_22895) | 41955..43094 | - | 1140 | WP_024222071 | TrbI/VirB10 family protein | virB10 |
| RCO50_RS22900 (RCO50_22900) | 43084..43785 | - | 702 | WP_000274524 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| RCO50_RS22905 (RCO50_22905) | 43851..44585 | - | 735 | WP_000432283 | virB8 family protein | virB8 |
| RCO50_RS22910 (RCO50_22910) | 44751..47108 | - | 2358 | WP_069057550 | VirB4 family type IV secretion system protein | virb4 |
| RCO50_RS22915 (RCO50_22915) | 47114..47434 | - | 321 | WP_010895893 | VirB3 family type IV secretion system protein | virB3 |
| RCO50_RS22920 (RCO50_22920) | 47505..47795 | - | 291 | WP_000865478 | TrbC/VirB2 family protein | virB2 |
| RCO50_RS22925 (RCO50_22925) | 47795..48379 | - | 585 | WP_001177116 | lytic transglycosylase domain-containing protein | virB1 |
| RCO50_RS22930 (RCO50_22930) | 48400..48798 | - | 399 | WP_001153669 | hypothetical protein | - |
| RCO50_RS22935 (RCO50_22935) | 48917..49354 | - | 438 | WP_000539665 | type IV pilus biogenesis protein PilM | - |
| RCO50_RS22940 (RCO50_22940) | 49360..50595 | - | 1236 | WP_000733391 | toxin co-regulated pilus biosynthesis Q family protein | - |
| RCO50_RS22945 (RCO50_22945) | 50598..50885 | - | 288 | WP_029785630 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| RCO50_RS22950 (RCO50_22950) | 51057..51692 | - | 636 | WP_000835769 | hypothetical protein | - |
| RCO50_RS22955 (RCO50_22955) | 51740..52549 | + | 810 | WP_024222072 | DUF5710 domain-containing protein | - |
| RCO50_RS22960 (RCO50_22960) | 52602..52856 | - | 255 | WP_000609210 | EexN family lipoprotein | - |
| RCO50_RS22965 (RCO50_22965) | 52859..53500 | - | 642 | WP_001434037 | type IV secretion system protein | - |
| RCO50_RS22970 (RCO50_22970) | 53506..54501 | - | 996 | WP_000276068 | type IV secretion system protein | virB6 |
| RCO50_RS22975 (RCO50_22975) | 54505..54762 | - | 258 | WP_000739144 | hypothetical protein | - |
| RCO50_RS22980 (RCO50_22980) | 54759..55061 | - | 303 | WP_000189499 | hypothetical protein | - |
| RCO50_RS22985 (RCO50_22985) | 55313..55867 | - | 555 | WP_227004539 | hypothetical protein | - |
| RCO50_RS22990 (RCO50_22990) | 56018..56680 | - | 663 | WP_001243159 | hypothetical protein | - |
| RCO50_RS22995 (RCO50_22995) | 56691..56861 | - | 171 | WP_000550721 | hypothetical protein | - |
| RCO50_RS23000 (RCO50_23000) | 56865..57308 | - | 444 | WP_000498521 | NfeD family protein | - |
| RCO50_RS23005 (RCO50_23005) | 57370..58323 | - | 954 | WP_072097371 | SPFH domain-containing protein | - |
| RCO50_RS23010 (RCO50_23010) | 58350..58526 | - | 177 | WP_000753050 | hypothetical protein | - |
| RCO50_RS23015 (RCO50_23015) | 58519..58734 | - | 216 | WP_001127357 | DUF1187 family protein | - |
| RCO50_RS23020 (RCO50_23020) | 58727..59179 | - | 453 | WP_000101552 | CaiF/GrlA family transcriptional regulator | - |