T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 33717..72553
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH83_RS25645 (LMH83_25630) | 31436..33736 | - | 2301 | WP_033816586 | F-type conjugative transfer protein TrbC | - |
| LMH83_RS25650 (LMH83_25635) | 33717..34841 | - | 1125 | WP_083574964 | DsbC family protein | trbB |
| LMH83_RS25655 (LMH83_25640) | 34838..36136 | - | 1299 | WP_001402878 | IncI1-type conjugal transfer protein TrbA | trbA |
| LMH83_RS27260 | 36933..37028 | + | 96 | WP_001363141 | DinQ-like type I toxin DqlB | - |
| LMH83_RS25665 (LMH83_25650) | 37091..37267 | - | 177 | WP_001054907 | hypothetical protein | - |
| LMH83_RS25670 (LMH83_25655) | 37417..37884 | - | 468 | WP_000598962 | thermonuclease family protein | - |
| LMH83_RS25675 (LMH83_25660) | 38043..38666 | + | 624 | WP_001155252 | helix-turn-helix domain-containing protein | - |
| LMH83_RS25680 (LMH83_25665) | 38864..39079 | - | 216 | WP_000266544 | hypothetical protein | - |
| LMH83_RS25685 (LMH83_25670) | 39083..39451 | - | 369 | WP_143410569 | hypothetical protein | - |
| LMH83_RS25690 (LMH83_25675) | 39751..39993 | - | 243 | WP_001401586 | hypothetical protein | - |
| LMH83_RS25695 (LMH83_25680) | 40323..40475 | + | 153 | WP_001302699 | Hok/Gef family protein | - |
| LMH83_RS25700 (LMH83_25685) | 40613..42199 | - | 1587 | WP_000004560 | TnsA endonuclease N-terminal domain-containing protein | - |
| LMH83_RS25705 (LMH83_25690) | 42473..43123 | - | 651 | WP_001044247 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LMH83_RS25710 (LMH83_25695) | 43212..45377 | - | 2166 | WP_000691810 | DotA/TraY family protein | traY |
| LMH83_RS25715 (LMH83_25700) | 45452..46021 | - | 570 | WP_000650752 | conjugal transfer protein TraX | - |
| LMH83_RS25720 (LMH83_25705) | 46018..47223 | - | 1206 | WP_001189549 | conjugal transfer protein TraW | traW |
| LMH83_RS25725 (LMH83_25710) | 47181..47801 | - | 621 | WP_000286854 | hypothetical protein | traV |
| LMH83_RS25730 (LMH83_25715) | 47801..50845 | - | 3045 | WP_001024767 | hypothetical protein | traU |
| LMH83_RS25735 (LMH83_25720) | 51140..51958 | - | 819 | WP_072107751 | conjugal transfer protein TraT | traT |
| LMH83_RS27265 | 51873..52124 | - | 252 | WP_001277573 | hypothetical protein | - |
| LMH83_RS25745 (LMH83_25730) | 52181..52579 | - | 399 | WP_000088813 | DUF6750 family protein | traR |
| LMH83_RS25750 (LMH83_25735) | 52626..53156 | - | 531 | WP_000987021 | conjugal transfer protein TraQ | traQ |
| LMH83_RS25755 (LMH83_25740) | 53153..53866 | - | 714 | WP_000787003 | conjugal transfer protein TraP | traP |
| LMH83_RS25760 (LMH83_25745) | 53863..55200 | - | 1338 | WP_001272017 | conjugal transfer protein TraO | traO |
| LMH83_RS25765 (LMH83_25750) | 55204..56178 | - | 975 | WP_000547385 | DotH/IcmK family type IV secretion protein | traN |
| LMH83_RS25770 (LMH83_25755) | 56189..56884 | - | 696 | WP_001287545 | DotI/IcmL family type IV secretion protein | traM |
| LMH83_RS25775 (LMH83_25760) | 56896..57246 | - | 351 | WP_001056367 | hypothetical protein | traL |
| LMH83_RS25780 (LMH83_25765) | 57263..61324 | - | 4062 | WP_000842453 | LPD7 domain-containing protein | - |
| LMH83_RS25785 (LMH83_25770) | 61388..61678 | - | 291 | WP_000817801 | IcmT/TraK family protein | traK |
| LMH83_RS25790 (LMH83_25775) | 61675..62823 | - | 1149 | WP_000775210 | plasmid transfer ATPase TraJ | virB11 |
| LMH83_RS25795 (LMH83_25780) | 62807..63643 | - | 837 | WP_000745049 | type IV secretory system conjugative DNA transfer family protein | traI |
| LMH83_RS25800 (LMH83_25785) | 63640..64098 | - | 459 | WP_001170111 | DotD/TraH family lipoprotein | - |
| LMH83_RS25805 (LMH83_25790) | 64202..65404 | - | 1203 | WP_000979993 | conjugal transfer protein TraF | - |
| LMH83_RS25810 (LMH83_25795) | 65506..66327 | - | 822 | WP_000845373 | hypothetical protein | traE |
| LMH83_RS25815 (LMH83_25800) | 66492..66686 | - | 195 | Protein_75 | integrase | - |
| LMH83_RS25820 (LMH83_25805) | 66800..68161 | - | 1362 | WP_001168171 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| LMH83_RS25825 (LMH83_25810) | 68179..68805 | - | 627 | WP_000939245 | prepilin peptidase | - |
| LMH83_RS25830 (LMH83_25815) | 68821..69306 | - | 486 | WP_001080767 | lytic transglycosylase domain-containing protein | virB1 |
| LMH83_RS25835 (LMH83_25820) | 69351..69887 | - | 537 | WP_000111521 | type 4 pilus major pilin | - |
| LMH83_RS25840 (LMH83_25825) | 69949..71043 | - | 1095 | WP_000697154 | type II secretion system F family protein | - |
| LMH83_RS25845 (LMH83_25830) | 71045..72553 | - | 1509 | WP_000880806 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LMH83_RS25850 (LMH83_25835) | 72657..73115 | - | 459 | WP_000095886 | type IV pilus biogenesis protein PilP | - |
| LMH83_RS25855 (LMH83_25840) | 73105..74400 | - | 1296 | WP_000129883 | type 4b pilus protein PilO2 | - |
| LMH83_RS25860 (LMH83_25845) | 74421..76040 | - | 1620 | WP_001035565 | PilN family type IVB pilus formation outer membrane protein | - |
| LMH83_RS25865 (LMH83_25850) | 76072..76509 | - | 438 | WP_000539951 | type IV pilus biogenesis protein PilM | - |