T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 51999..78744
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIZ21_RS24375 (NIZ21_24350) | 47964..48398 | + | 435 | WP_000845873 | conjugation system SOS inhibitor PsiB | - |
| NIZ21_RS24380 (NIZ21_24355) | 48395..49157 | + | 763 | Protein_53 | plasmid SOS inhibition protein A | - |
| NIZ21_RS24385 (NIZ21_24360) | 49126..49314 | - | 189 | WP_001299721 | hypothetical protein | - |
| NIZ21_RS24390 (NIZ21_24365) | 49336..49485 | + | 150 | Protein_55 | plasmid maintenance protein Mok | - |
| NIZ21_RS24395 (NIZ21_24370) | 49427..49552 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| NIZ21_RS24400 (NIZ21_24375) | 49772..50002 | + | 231 | WP_256876178 | hypothetical protein | - |
| NIZ21_RS24405 (NIZ21_24380) | 50000..50173 | - | 174 | Protein_58 | hypothetical protein | - |
| NIZ21_RS24410 (NIZ21_24385) | 50243..50449 | + | 207 | WP_000547971 | hypothetical protein | - |
| NIZ21_RS24415 (NIZ21_24390) | 50474..50761 | + | 288 | WP_000107535 | hypothetical protein | - |
| NIZ21_RS24420 (NIZ21_24395) | 50881..51702 | + | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| NIZ21_RS24425 (NIZ21_24400) | 51999..52646 | - | 648 | WP_256876177 | transglycosylase SLT domain-containing protein | virB1 |
| NIZ21_RS24430 (NIZ21_24405) | 52923..53306 | + | 384 | WP_000124979 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NIZ21_RS24435 (NIZ21_24410) | 53497..54183 | + | 687 | WP_000332493 | PAS domain-containing protein | - |
| NIZ21_RS24440 (NIZ21_24415) | 54279..54506 | + | 228 | WP_001254385 | conjugal transfer relaxosome protein TraY | - |
| NIZ21_RS24445 (NIZ21_24420) | 54540..54899 | + | 360 | WP_000340272 | type IV conjugative transfer system pilin TraA | - |
| NIZ21_RS24450 (NIZ21_24425) | 54914..55225 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| NIZ21_RS24455 (NIZ21_24430) | 55247..55813 | + | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| NIZ21_RS24460 (NIZ21_24435) | 55800..56528 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| NIZ21_RS24465 (NIZ21_24440) | 56528..57955 | + | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NIZ21_RS24470 (NIZ21_24445) | 57945..58517 | + | 573 | WP_000002794 | conjugal transfer pilus-stabilizing protein TraP | - |
| NIZ21_RS24475 (NIZ21_24450) | 58514..58831 | + | 318 | WP_001057292 | conjugal transfer protein TrbD | virb4 |
| NIZ21_RS24480 (NIZ21_24455) | 58828..59079 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| NIZ21_RS24485 (NIZ21_24460) | 59076..59591 | + | 516 | WP_000809906 | type IV conjugative transfer system lipoprotein TraV | traV |
| NIZ21_RS24490 (NIZ21_24465) | 59725..59946 | + | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| NIZ21_RS24495 (NIZ21_24470) | 60106..62733 | + | 2628 | WP_001064248 | type IV secretion system protein TraC | virb4 |
| NIZ21_RS24500 (NIZ21_24475) | 62730..63116 | + | 387 | WP_000214096 | type-F conjugative transfer system protein TrbI | - |
| NIZ21_RS24505 (NIZ21_24480) | 63113..63745 | + | 633 | WP_001203745 | type-F conjugative transfer system protein TraW | traW |
| NIZ21_RS24510 (NIZ21_24485) | 63742..64734 | + | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| NIZ21_RS24515 (NIZ21_24490) | 64760..65221 | + | 462 | WP_000277845 | hypothetical protein | - |
| NIZ21_RS24520 (NIZ21_24495) | 65251..65703 | + | 453 | WP_000069427 | hypothetical protein | - |
| NIZ21_RS24525 (NIZ21_24500) | 65731..66369 | + | 639 | WP_001104248 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NIZ21_RS24530 (NIZ21_24505) | 66366..68174 | + | 1809 | WP_000821818 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NIZ21_RS24535 (NIZ21_24510) | 68201..68458 | + | 258 | WP_000864325 | conjugal transfer protein TrbE | - |
| NIZ21_RS24540 (NIZ21_24515) | 68451..69194 | + | 744 | WP_001030376 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NIZ21_RS24545 (NIZ21_24520) | 69210..69557 | + | 348 | WP_001287895 | conjugal transfer protein TrbA | - |
| NIZ21_RS24550 (NIZ21_24525) | 69676..69960 | + | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NIZ21_RS24555 (NIZ21_24530) | 69947..70492 | + | 546 | WP_000059847 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NIZ21_RS24560 (NIZ21_24535) | 70422..70784 | + | 363 | WP_001443292 | P-type conjugative transfer protein TrbJ | - |
| NIZ21_RS24565 (NIZ21_24540) | 70784..72157 | + | 1374 | Protein_90 | conjugal transfer pilus assembly protein TraH | - |
| NIZ21_RS24570 (NIZ21_24545) | 72154..74976 | + | 2823 | WP_011251382 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NIZ21_RS24575 (NIZ21_24550) | 74991..75494 | + | 504 | WP_000605510 | hypothetical protein | - |
| NIZ21_RS24580 (NIZ21_24555) | 75526..76257 | + | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| NIZ21_RS24585 (NIZ21_24560) | 76510..78744 | + | 2235 | WP_256877816 | type IV conjugative transfer system coupling protein TraD | virb4 |