T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2278..26091
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIY95_RS24510 (NIY95_24480) | 285..669 | + | 385 | Protein_1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NIY95_RS24515 (NIY95_24485) | 860..1547 | + | 688 | Protein_2 | PAS domain-containing protein | - |
| NIY95_RS24520 (NIY95_24490) | 1643..1870 | + | 228 | WP_001254385 | conjugal transfer relaxosome protein TraY | - |
| NIY95_RS24525 (NIY95_24495) | 1904..2263 | + | 360 | WP_000340272 | type IV conjugative transfer system pilin TraA | - |
| NIY95_RS24530 (NIY95_24500) | 2278..2589 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| NIY95_RS24535 (NIY95_24505) | 2611..3177 | + | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| NIY95_RS24540 (NIY95_24510) | 3222..3893 | + | 672 | WP_001340581 | type-F conjugative transfer system secretin TraK | traK |
| NIY95_RS24545 (NIY95_24515) | 3893..5320 | + | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NIY95_RS24550 (NIY95_24520) | 5310..5882 | + | 573 | WP_000002794 | conjugal transfer pilus-stabilizing protein TraP | - |
| NIY95_RS24555 (NIY95_24525) | 5879..6196 | + | 318 | WP_001057292 | conjugal transfer protein TrbD | virb4 |
| NIY95_RS24560 (NIY95_24530) | 6193..6444 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| NIY95_RS24565 (NIY95_24535) | 6441..6956 | + | 516 | WP_000809906 | type IV conjugative transfer system lipoprotein TraV | traV |
| NIY95_RS24570 (NIY95_24540) | 7090..7311 | + | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| NIY95_RS24575 (NIY95_24545) | 7471..10098 | + | 2628 | WP_001064248 | type IV secretion system protein TraC | virb4 |
| NIY95_RS24580 (NIY95_24550) | 10095..10481 | + | 387 | WP_000214096 | type-F conjugative transfer system protein TrbI | - |
| NIY95_RS24585 (NIY95_24555) | 10478..11110 | + | 633 | WP_001203745 | type-F conjugative transfer system protein TraW | traW |
| NIY95_RS24590 (NIY95_24560) | 11107..12099 | + | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| NIY95_RS24595 (NIY95_24565) | 12125..12586 | + | 462 | WP_000277845 | hypothetical protein | - |
| NIY95_RS24600 (NIY95_24570) | 12616..13068 | + | 453 | WP_000069427 | hypothetical protein | - |
| NIY95_RS24605 (NIY95_24575) | 13096..13734 | + | 639 | WP_001104248 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NIY95_RS24610 (NIY95_24580) | 13731..15539 | + | 1809 | WP_000821818 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NIY95_RS24615 (NIY95_24585) | 15566..15823 | + | 258 | WP_000864325 | conjugal transfer protein TrbE | - |
| NIY95_RS24620 (NIY95_24590) | 15816..16559 | + | 744 | WP_001030376 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NIY95_RS24625 (NIY95_24595) | 16575..16922 | + | 348 | WP_001287895 | conjugal transfer protein TrbA | - |
| NIY95_RS24630 (NIY95_24600) | 17041..17325 | + | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NIY95_RS24635 (NIY95_24605) | 17312..17857 | + | 546 | WP_000059847 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NIY95_RS24640 (NIY95_24610) | 17787..18149 | + | 363 | WP_001443292 | P-type conjugative transfer protein TrbJ | - |
| NIY95_RS24645 (NIY95_24615) | 18149..19522 | + | 1374 | WP_001137358 | conjugal transfer pilus assembly protein TraH | traH |
| NIY95_RS24650 (NIY95_24620) | 19519..22341 | + | 2823 | WP_011251382 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NIY95_RS24655 (NIY95_24625) | 22356..22859 | + | 504 | WP_000605510 | hypothetical protein | - |
| NIY95_RS24660 (NIY95_24630) | 22891..23622 | + | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| NIY95_RS24665 (NIY95_24635) | 23875..26091 | + | 2217 | WP_153449148 | type IV conjugative transfer system coupling protein TraD | virb4 |