T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32739..62509
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ108_RS23380 (AI2999V1_4532) | 28035..28349 | + | 315 | WP_000872086 | hypothetical protein | - |
| LQ108_RS23385 | 28499..28651 | + | 153 | Protein_35 | DUF5431 family protein | - |
| LQ108_RS23390 (AI2999V1_4533) | 28596..28718 | + | 123 | WP_223200913 | Hok/Gef family protein | - |
| LQ108_RS23395 | 29019..29268 | - | 250 | Protein_37 | hypothetical protein | - |
| LQ108_RS23400 (AI2999V1_4534) | 29564..29887 | + | 324 | WP_000533253 | hypothetical protein | - |
| LQ108_RS23405 (AI2999V1_4535) | 29946..30188 | + | 243 | WP_000540588 | hypothetical protein | - |
| LQ108_RS23410 | 30454..30744 | + | 291 | WP_073972341 | hypothetical protein | - |
| LQ108_RS23415 (AI2999V1_4536) | 31215..31511 | + | 297 | WP_001272251 | hypothetical protein | - |
| LQ108_RS23420 (AI2999V1_4537) | 31621..32442 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| LQ108_RS23425 (AI2999V1_4538) | 32739..33341 | - | 603 | WP_077761845 | transglycosylase SLT domain-containing protein | virB1 |
| LQ108_RS23430 (AI2999V1_4539) | 33662..34045 | + | 384 | WP_001151538 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LQ108_RS23435 (AI2999V1_4540) | 34232..34921 | + | 690 | WP_021542442 | conjugal transfer transcriptional regulator TraJ | - |
| LQ108_RS23440 | 35020..35415 | + | 396 | WP_348637393 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| LQ108_RS23445 (AI2999V1_4541) | 35448..35810 | + | 363 | WP_021542441 | type IV conjugative transfer system pilin TraA | - |
| LQ108_RS23450 (AI2999V1_4542) | 35825..36136 | + | 312 | WP_000012100 | type IV conjugative transfer system protein TraL | traL |
| LQ108_RS23455 (AI2999V1_4543) | 36158..36724 | + | 567 | WP_021503373 | type IV conjugative transfer system protein TraE | traE |
| LQ108_RS23460 (AI2999V1_4544) | 36711..37439 | + | 729 | WP_001230769 | type-F conjugative transfer system secretin TraK | traK |
| LQ108_RS23465 (AI2999V1_4545) | 37439..38866 | + | 1428 | WP_115763536 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LQ108_RS23470 (AI2999V1_4546) | 38856..39446 | + | 591 | WP_021542439 | conjugal transfer pilus-stabilizing protein TraP | - |
| LQ108_RS23475 (AI2999V1_4547) | 39433..39753 | + | 321 | WP_024188751 | conjugal transfer protein TrbD | - |
| LQ108_RS23480 (AI2999V1_4548) | 39750..40265 | + | 516 | WP_001681800 | type IV conjugative transfer system lipoprotein TraV | traV |
| LQ108_RS23485 | 40400..40621 | + | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| LQ108_RS23490 (AI2999V1_4549) | 40614..41087 | + | 474 | WP_021542437 | hypothetical protein | - |
| LQ108_RS23495 (AI2999V1_4550) | 41167..41382 | + | 216 | WP_021542436 | hypothetical protein | - |
| LQ108_RS23500 | 41410..41772 | + | 363 | WP_021542435 | hypothetical protein | - |
| LQ108_RS23505 (AI2999V1_4551) | 41898..44528 | + | 2631 | WP_021526637 | type IV secretion system protein TraC | virb4 |
| LQ108_RS23510 (AI2999V1_4552) | 44525..44911 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| LQ108_RS23515 (AI2999V1_4553) | 44908..45540 | + | 633 | WP_021526638 | type-F conjugative transfer system protein TraW | traW |
| LQ108_RS23520 (AI2999V1_4554) | 45537..46529 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| LQ108_RS23525 (AI2999V1_4555) | 46559..46864 | + | 306 | WP_000224418 | hypothetical protein | - |
| LQ108_RS23530 (AI2999V1_4556) | 46873..47511 | + | 639 | WP_001080251 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LQ108_RS23535 (AI2999V1_4557) | 47508..49358 | + | 1851 | WP_050009854 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LQ108_RS23540 (AI2999V1_4558) | 49385..49642 | + | 258 | WP_000864314 | conjugal transfer protein TrbE | - |
| LQ108_RS23545 (AI2999V1_4559) | 49635..50378 | + | 744 | WP_001030385 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LQ108_RS23550 (AI2999V1_4560) | 50392..50745 | + | 354 | WP_089564714 | conjugal transfer protein TrbA | - |
| LQ108_RS23555 (AI2999V1_4562) | 51177..52322 | - | 1146 | WP_089564715 | hypothetical protein | - |
| LQ108_RS23560 (AI2999V1_4563) | 52379..52660 | + | 282 | WP_089564716 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LQ108_RS23565 (AI2999V1_4564) | 52647..53192 | + | 546 | WP_000059830 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LQ108_RS23570 (AI2999V1_4565) | 53122..53469 | + | 348 | WP_136747986 | P-type conjugative transfer protein TrbJ | - |
| LQ108_RS23575 (AI2999V1_4566) | 53450..53842 | + | 393 | WP_014106973 | F-type conjugal transfer protein TrbF | - |
| LQ108_RS23580 (AI2999V1_4567) | 53829..55202 | + | 1374 | WP_014106974 | conjugal transfer pilus assembly protein TraH | traH |
| LQ108_RS23585 (AI2999V1_4568) | 55199..58024 | + | 2826 | WP_113328789 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LQ108_RS23590 (AI2999V1_4569) | 58021..58530 | + | 510 | WP_000628111 | conjugal transfer entry exclusion protein TraS | - |
| LQ108_RS23595 (AI2999V1_4570) | 58544..59275 | + | 732 | WP_012881123 | conjugal transfer complement resistance protein TraT | - |
| LQ108_RS23600 (AI2999V1_4571) | 59478..60215 | + | 738 | WP_012881122 | hypothetical protein | - |
| LQ108_RS23605 (AI2999V1_4572) | 60266..62509 | + | 2244 | WP_128867106 | type IV conjugative transfer system coupling protein TraD | prgC |