T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3415..14635
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RAM31_RS13335 (RAM31_13330) | 1186..1578 | - | 393 | WP_000393259 | GNAT family N-acetyltransferase | - |
| RAM31_RS13340 (RAM31_13335) | 1635..2009 | - | 375 | Protein_2 | IS256 family transposase | - |
| RAM31_RS13345 (RAM31_13340) | 2070..2744 | - | 675 | WP_011117680 | IS6-like element IS257 family transposase | - |
| RAM31_RS13350 (RAM31_13345) | 2782..2949 | - | 168 | WP_000869301 | hypothetical protein | - |
| RAM31_RS13355 (RAM31_13350) | 3006..3398 | - | 393 | WP_000608970 | single-stranded DNA-binding protein | - |
| RAM31_RS13360 (RAM31_13355) | 3415..3900 | - | 486 | WP_258390337 | conjugal transfer protein TrbL family protein | trsL |
| RAM31_RS13365 (RAM31_13360) | 3855..4331 | - | 477 | WP_258390336 | hypothetical protein | trsL |
| RAM31_RS13370 (RAM31_13365) | 4409..6049 | - | 1641 | WP_000209436 | VirD4-like conjugal transfer protein, CD1115 family | - |
| RAM31_RS13375 (RAM31_13370) | 6046..6510 | - | 465 | WP_000715273 | hypothetical protein | trsJ |
| RAM31_RS13380 (RAM31_13375) | 6526..8628 | - | 2103 | WP_001094109 | DNA topoisomerase III | - |
| RAM31_RS13385 (RAM31_13380) | 8644..9129 | - | 486 | WP_000735569 | TrsH/TraH family protein | - |
| RAM31_RS13390 (RAM31_13385) | 9139..10215 | - | 1077 | WP_000269385 | CHAP domain-containing protein | trsG |
| RAM31_RS13395 (RAM31_13390) | 10233..11513 | - | 1281 | WP_000702361 | membrane protein | trsF |
| RAM31_RS13400 (RAM31_13395) | 11525..13537 | - | 2013 | WP_000874919 | VirB4 family type IV secretion system protein | virb4 |
| RAM31_RS13405 (RAM31_13400) | 13558..14241 | - | 684 | WP_306178959 | TrsD/TraD family conjugative transfer protein | trsD |
| RAM31_RS13410 (RAM31_13405) | 14228..14635 | - | 408 | WP_306178960 | hypothetical protein | trsC |
| RAM31_RS13415 (RAM31_13410) | 14695..15012 | - | 318 | WP_000591622 | CagC family type IV secretion system protein | - |
| RAM31_RS13420 (RAM31_13415) | 15029..16003 | - | 975 | WP_000368849 | conjugative transfer protein TrsA | - |
| RAM31_RS13425 (RAM31_13420) | 16175..16363 | + | 189 | WP_001063224 | hypothetical protein | - |
| RAM31_RS13430 (RAM31_13425) | 16472..17146 | - | 675 | WP_001106019 | IS6-like element IS257 family transposase | - |
| RAM31_RS13435 (RAM31_13430) | 17190..17336 | + | 147 | WP_001817822 | hypothetical protein | - |
| RAM31_RS13440 (RAM31_13435) | 17496..18266 | + | 771 | WP_001795128 | aminoglycoside O-nucleotidyltransferase ANT(4')-Ia | - |
| RAM31_RS13445 (RAM31_13440) | 18593..19267 | - | 675 | WP_001106022 | IS6-like element IS257 family transposase | - |