T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 52892..78090
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3Y18_RS27700 (F3Y18_27705) | 52892..55165 | - | 2274 | WP_073568742 | type IV conjugative transfer system coupling protein TraD | virb4 |
| F3Y18_RS29240 | 55299..55628 | - | 330 | WP_223856629 | hypothetical protein | - |
| F3Y18_RS29245 | 55636..55974 | - | 339 | WP_032072912 | tetratricopeptide repeat protein | - |
| F3Y18_RS27710 (F3Y18_27715) | 56049..56480 | - | 432 | WP_008324118 | entry exclusion protein | - |
| F3Y18_RS27715 (F3Y18_27720) | 56502..59324 | - | 2823 | WP_008324119 | conjugal transfer mating-pair stabilization protein TraG | traG |
| F3Y18_RS27720 (F3Y18_27725) | 59324..60694 | - | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| F3Y18_RS27725 (F3Y18_27730) | 60681..61109 | - | 429 | WP_008324122 | hypothetical protein | - |
| F3Y18_RS27730 (F3Y18_27735) | 61102..61656 | - | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| F3Y18_RS27735 (F3Y18_27740) | 61646..61894 | - | 249 | WP_016479982 | type-F conjugative transfer system pilin chaperone TraQ | - |
| F3Y18_RS27740 (F3Y18_27745) | 61911..62660 | - | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| F3Y18_RS27745 (F3Y18_27750) | 62691..62879 | - | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| F3Y18_RS27750 (F3Y18_27755) | 62911..64764 | - | 1854 | WP_016479983 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| F3Y18_RS27755 (F3Y18_27760) | 64761..65390 | - | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| F3Y18_RS27760 (F3Y18_27765) | 65407..66393 | - | 987 | WP_042934586 | conjugal transfer pilus assembly protein TraU | traU |
| F3Y18_RS27765 (F3Y18_27770) | 66396..67043 | - | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| F3Y18_RS27770 (F3Y18_27775) | 67043..67390 | - | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| F3Y18_RS27775 (F3Y18_27780) | 67387..70017 | - | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| F3Y18_RS27780 (F3Y18_27785) | 70010..70576 | - | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| F3Y18_RS29250 | 70566..70733 | - | 168 | WP_223274120 | Clp protease | - |
| F3Y18_RS27790 (F3Y18_27795) | 70951..71136 | - | 186 | WP_008324139 | hypothetical protein | - |
| F3Y18_RS27795 (F3Y18_27800) | 71140..71364 | - | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| F3Y18_RS27800 (F3Y18_27805) | 71484..72023 | - | 540 | WP_016247533 | type IV conjugative transfer system lipoprotein TraV | traV |
| F3Y18_RS27805 (F3Y18_27810) | 72045..73439 | - | 1395 | WP_016479986 | F-type conjugal transfer pilus assembly protein TraB | traB |
| F3Y18_RS27810 (F3Y18_27815) | 73426..74169 | - | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| F3Y18_RS27815 (F3Y18_27820) | 74156..74722 | - | 567 | WP_016247535 | type IV conjugative transfer system protein TraE | traE |
| F3Y18_RS27820 (F3Y18_27825) | 74737..75042 | - | 306 | WP_008324160 | type IV conjugative transfer system protein TraL | traL |
| F3Y18_RS27825 (F3Y18_27830) | 75193..75543 | - | 351 | WP_016247536 | type IV conjugative transfer system pilin TraA | - |
| F3Y18_RS27830 (F3Y18_27835) | 75601..75825 | - | 225 | WP_008324165 | TraY domain-containing protein | - |
| F3Y18_RS27835 (F3Y18_27840) | 75912..76601 | - | 690 | WP_008324166 | hypothetical protein | - |
| F3Y18_RS27840 (F3Y18_27845) | 76790..77182 | - | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| F3Y18_RS27845 (F3Y18_27850) | 77614..78090 | + | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | virB1 |
| F3Y18_RS27850 (F3Y18_27855) | 78137..78667 | - | 531 | WP_008324170 | antirestriction protein | - |
| F3Y18_RS27855 (F3Y18_27860) | 79294..80124 | - | 831 | WP_008324171 | N-6 DNA methylase | - |
| F3Y18_RS27860 (F3Y18_27865) | 80167..80430 | - | 264 | WP_008324174 | hypothetical protein | - |
| F3Y18_RS27865 (F3Y18_27870) | 80516..80860 | - | 345 | WP_008324177 | hypothetical protein | - |
| F3Y18_RS27870 (F3Y18_27875) | 80907..81194 | - | 288 | WP_008324178 | hypothetical protein | - |
| F3Y18_RS27875 (F3Y18_27880) | 81248..81622 | - | 375 | WP_008324180 | hypothetical protein | - |
| F3Y18_RS27880 (F3Y18_27885) | 82249..82608 | - | 360 | WP_015493069 | hypothetical protein | - |
| F3Y18_RS28985 (F3Y18_27890) | 82670..82993 | - | 324 | WP_008324183 | hypothetical protein | - |