T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 23148..53162
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3Y18_RS13345 (F3Y18_13350) | 23148..25460 | - | 2313 | WP_015065541 | type IV conjugative transfer system coupling protein TraD | virb4 |
| F3Y18_RS28725 | 25589..26278 | - | 690 | WP_015065540 | hypothetical protein | - |
| F3Y18_RS13355 (F3Y18_13360) | 26470..27201 | - | 732 | WP_032329926 | conjugal transfer complement resistance protein TraT | - |
| F3Y18_RS13360 (F3Y18_13365) | 27510..28034 | - | 525 | WP_015065538 | hypothetical protein | - |
| F3Y18_RS13365 (F3Y18_13370) | 28045..30888 | - | 2844 | WP_023157999 | conjugal transfer mating-pair stabilization protein TraG | traG |
| F3Y18_RS13370 (F3Y18_13375) | 30888..32267 | - | 1380 | WP_023158000 | conjugal transfer pilus assembly protein TraH | traH |
| F3Y18_RS13375 (F3Y18_13380) | 32245..32688 | - | 444 | WP_023158001 | F-type conjugal transfer protein TrbF | - |
| F3Y18_RS13380 (F3Y18_13385) | 32734..33291 | - | 558 | WP_023158002 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| F3Y18_RS13385 (F3Y18_13390) | 33263..33502 | - | 240 | WP_023158003 | type-F conjugative transfer system pilin chaperone TraQ | - |
| F3Y18_RS13390 (F3Y18_13395) | 33513..34265 | - | 753 | WP_015065535 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| F3Y18_RS13395 (F3Y18_13400) | 34286..34612 | - | 327 | WP_015065534 | hypothetical protein | - |
| F3Y18_RS13400 (F3Y18_13405) | 34625..34873 | - | 249 | WP_004152675 | hypothetical protein | - |
| F3Y18_RS13405 (F3Y18_13410) | 34851..35105 | - | 255 | WP_015065558 | conjugal transfer protein TrbE | - |
| F3Y18_RS13410 (F3Y18_13415) | 35137..37092 | - | 1956 | WP_015065533 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| F3Y18_RS13415 (F3Y18_13420) | 37151..37798 | - | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| F3Y18_RS28730 | 37877..38053 | - | 177 | WP_162866177 | hypothetical protein | - |
| F3Y18_RS13420 (F3Y18_13425) | 38074..39063 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| F3Y18_RS13425 (F3Y18_13430) | 39060..39461 | - | 402 | WP_023158005 | hypothetical protein | - |
| F3Y18_RS13430 (F3Y18_13435) | 39496..40131 | - | 636 | WP_023158006 | type-F conjugative transfer system protein TraW | traW |
| F3Y18_RS13435 (F3Y18_13440) | 40131..40520 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| F3Y18_RS13440 (F3Y18_13445) | 40520..43159 | - | 2640 | WP_023158007 | type IV secretion system protein TraC | virb4 |
| F3Y18_RS13445 (F3Y18_13450) | 43231..43629 | - | 399 | WP_023158008 | hypothetical protein | - |
| F3Y18_RS13450 (F3Y18_13455) | 43637..44026 | - | 390 | WP_023158009 | hypothetical protein | - |
| F3Y18_RS13455 (F3Y18_13460) | 44069..44473 | - | 405 | WP_016831042 | hypothetical protein | - |
| F3Y18_RS13460 (F3Y18_13465) | 44540..44851 | - | 312 | WP_014386200 | hypothetical protein | - |
| F3Y18_RS13465 (F3Y18_13470) | 44852..45070 | - | 219 | WP_014386199 | hypothetical protein | - |
| F3Y18_RS13470 (F3Y18_13475) | 45094..45383 | - | 290 | Protein_51 | hypothetical protein | - |
| F3Y18_RS13475 (F3Y18_13480) | 45388..45798 | - | 411 | WP_016831039 | hypothetical protein | - |
| F3Y18_RS13480 (F3Y18_13485) | 45930..46514 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| F3Y18_RS13485 (F3Y18_13490) | 46537..47133 | - | 597 | Protein_54 | conjugal transfer pilus-stabilizing protein TraP | - |
| F3Y18_RS13490 (F3Y18_13495) | 47126..48550 | - | 1425 | WP_023158013 | F-type conjugal transfer pilus assembly protein TraB | traB |
| F3Y18_RS13495 (F3Y18_13500) | 48550..49290 | - | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| F3Y18_RS13500 (F3Y18_13505) | 49277..49843 | - | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| F3Y18_RS13505 (F3Y18_13510) | 49863..50168 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| F3Y18_RS13510 (F3Y18_13515) | 50182..50550 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| F3Y18_RS13515 (F3Y18_13520) | 50612..50818 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| F3Y18_RS13520 (F3Y18_13525) | 50951..51670 | - | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| F3Y18_RS13525 (F3Y18_13530) | 51870..52286 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| F3Y18_RS13530 (F3Y18_13535) | 52677..53162 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| F3Y18_RS13535 (F3Y18_13540) | 53195..53524 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| F3Y18_RS13540 (F3Y18_13545) | 53557..54378 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| F3Y18_RS13555 (F3Y18_13560) | 55206..55769 | - | 564 | WP_004182054 | methyltransferase | - |
| F3Y18_RS13560 (F3Y18_13565) | 55817..57172 | - | 1356 | WP_004182052 | DUF3560 domain-containing protein | - |
| F3Y18_RS13565 (F3Y18_13570) | 57224..57454 | - | 231 | WP_001568051 | hypothetical protein | - |
| F3Y18_RS13570 (F3Y18_13575) | 57546..57773 | - | 228 | WP_004182050 | hypothetical protein | - |