T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 9100..37243
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RA144_RS00040 (EMBEDMKO_00008) | 9100..11280 | - | 2181 | WP_021518883 | type IV conjugative transfer system coupling protein TraD | virb4 |
| RA144_RS00045 (EMBEDMKO_00009) | 11331..12068 | - | 738 | WP_015059020 | hypothetical protein | - |
| RA144_RS00050 (EMBEDMKO_00010) | 12271..13002 | - | 732 | WP_021559024 | conjugal transfer complement resistance protein TraT | - |
| RA144_RS00055 (EMBEDMKO_00011) | 13027..13548 | - | 522 | WP_000632668 | conjugal transfer entry exclusion protein TraS | - |
| RA144_RS00060 (EMBEDMKO_00012) | 13581..16397 | - | 2817 | WP_015059018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| RA144_RS00065 | 16394..17767 | - | 1374 | WP_000944325 | conjugal transfer pilus assembly protein TraH | traH |
| RA144_RS00070 (EMBEDMKO_00014) | 17754..18146 | - | 393 | WP_000126338 | F-type conjugal transfer protein TrbF | - |
| RA144_RS00075 (EMBEDMKO_00015) | 18100..18414 | - | 315 | WP_001384255 | P-type conjugative transfer protein TrbJ | - |
| RA144_RS00080 (EMBEDMKO_00016) | 18404..18949 | - | 546 | WP_000059817 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| RA144_RS00085 (EMBEDMKO_00017) | 18936..19217 | - | 282 | WP_000549793 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RA144_RS00090 (EMBEDMKO_00018) | 19333..20076 | - | 744 | WP_015059017 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| RA144_RS00095 (EMBEDMKO_00019) | 20069..20326 | - | 258 | WP_053913405 | conjugal transfer protein TrbE | - |
| RA144_RS00100 (EMBEDMKO_00020) | 20353..22203 | - | 1851 | WP_015059015 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| RA144_RS00105 (EMBEDMKO_00021) | 22200..22622 | - | 423 | WP_001229309 | HNH endonuclease | - |
| RA144_RS00110 (EMBEDMKO_00022) | 22648..23019 | - | 372 | WP_000056336 | hypothetical protein | - |
| RA144_RS00115 (EMBEDMKO_00023) | 23016..23654 | - | 639 | WP_000087532 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| RA144_RS00120 (EMBEDMKO_00024) | 23681..24202 | - | 522 | WP_015059014 | hypothetical protein | - |
| RA144_RS00125 (EMBEDMKO_00025) | 24265..24573 | - | 309 | WP_305847074 | hypothetical protein | - |
| RA144_RS00130 (EMBEDMKO_00026) | 24600..25592 | - | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| RA144_RS00135 (EMBEDMKO_00027) | 25589..26221 | - | 633 | WP_001203735 | type-F conjugative transfer system protein TraW | traW |
| RA144_RS00140 (EMBEDMKO_00028) | 26218..26604 | - | 387 | WP_015059013 | type-F conjugative transfer system protein TrbI | - |
| RA144_RS00145 (EMBEDMKO_00029) | 26601..29228 | - | 2628 | WP_015059012 | type IV secretion system protein TraC | virb4 |
| RA144_RS00150 | 29388..29609 | - | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| RA144_RS00155 (EMBEDMKO_00030) | 29744..30259 | - | 516 | WP_000809902 | type IV conjugative transfer system lipoprotein TraV | traV |
| RA144_RS00160 (EMBEDMKO_00031) | 30256..30507 | - | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| RA144_RS00165 (EMBEDMKO_00032) | 30519..30710 | - | 192 | WP_032072783 | conjugal transfer protein TrbD | - |
| RA144_RS00170 (EMBEDMKO_00033) | 30703..31293 | - | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| RA144_RS00175 (EMBEDMKO_00034) | 31283..32710 | - | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| RA144_RS00180 (EMBEDMKO_00035) | 32710..33438 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| RA144_RS00185 (EMBEDMKO_00036) | 33425..33991 | - | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| RA144_RS00190 (EMBEDMKO_00037) | 34013..34324 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| RA144_RS00195 (EMBEDMKO_00038) | 34339..34704 | - | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| RA144_RS00200 | 34738..34965 | - | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| RA144_RS00205 (EMBEDMKO_00040) | 35059..35745 | - | 687 | WP_015059009 | PAS domain-containing protein | - |
| RA144_RS00210 (EMBEDMKO_00041) | 35936..36319 | - | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| RA144_RS00215 (EMBEDMKO_00042) | 36596..37243 | + | 648 | WP_015059008 | transglycosylase SLT domain-containing protein | virB1 |
| RA144_RS00220 (EMBEDMKO_00043) | 37540..38361 | - | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| RA144_RS00225 (EMBEDMKO_00044) | 38472..38768 | - | 297 | WP_001272251 | hypothetical protein | - |
| RA144_RS00230 | 39068..39364 | + | 297 | Protein_45 | hypothetical protein | - |
| RA144_RS00235 | 39683..39808 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| RA144_RS00240 (EMBEDMKO_00045) | 39750..39899 | - | 150 | Protein_47 | plasmid maintenance protein Mok | - |
| RA144_RS00245 (EMBEDMKO_00046) | 40121..40840 | - | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| RA144_RS00250 (EMBEDMKO_00047) | 40837..41271 | - | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |