T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 73973..104346
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RA126_RS00400 | 69145..69948 | - | 804 | WP_001082319 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| RA126_RS00405 (pSH12sh288-1_00075) | 70009..70824 | - | 816 | WP_001043260 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| RA126_RS00410 (pSH12sh288-1_00078) | 71689..73992 | - | 2304 | WP_000077663 | F-type conjugative transfer protein TrbC | - |
| RA126_RS00415 (pSH12sh288-1_00079) | 73973..75097 | - | 1125 | WP_000152378 | DsbC family protein | trbB |
| RA126_RS00420 (pSH12sh288-1_00080) | 75094..76401 | - | 1308 | WP_001513486 | IncI1-type conjugal transfer protein TrbA | trbA |
| RA126_RS00425 (pSH12sh288-1_00081) | 77033..77815 | - | 783 | WP_001300609 | IS21-like element IS100kyp family helper ATPase IstB | - |
| RA126_RS00430 (pSH12sh288-1_00082) | 77812..78834 | - | 1023 | WP_000255944 | IS21-like element IS100 family transposase | - |
| RA126_RS00435 | 78921..79013 | + | 93 | WP_025766395 | DinQ-like type I toxin DqlB | - |
| RA126_RS00440 | 79602..79697 | + | 96 | WP_001363141 | DinQ-like type I toxin DqlB | - |
| RA126_RS00445 (pSH12sh288-1_00084) | 79760..79936 | - | 177 | WP_001054907 | hypothetical protein | - |
| RA126_RS00450 (pSH12sh288-1_00085) | 80088..80555 | - | 468 | WP_000598962 | thermonuclease family protein | - |
| RA126_RS00455 (pSH12sh288-1_00086) | 80714..81337 | + | 624 | WP_001155251 | helix-turn-helix domain-containing protein | - |
| RA126_RS00460 (pSH12sh288-1_00088) | 81535..81750 | - | 216 | WP_000266543 | hypothetical protein | - |
| RA126_RS00465 (pSH12sh288-1_00089) | 81754..82122 | - | 369 | WP_001390887 | hypothetical protein | - |
| RA126_RS00470 (pSH12sh288-1_00090) | 82421..82663 | - | 243 | WP_001363144 | hypothetical protein | - |
| RA126_RS00475 | 82993..83145 | + | 153 | WP_001302699 | Hok/Gef family protein | - |
| RA126_RS00480 (pSH12sh288-1_00092) | 83283..83957 | - | 675 | WP_305847066 | TnsA endonuclease N-terminal domain-containing protein | - |
| RA126_RS00485 (pSH12sh288-1_00093) | 83906..84868 | - | 963 | WP_241381294 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| RA126_RS00490 (pSH12sh288-1_00094) | 85142..85792 | - | 651 | WP_001044247 | plasmid IncI1-type surface exclusion protein ExcA | - |
| RA126_RS00495 (pSH12sh288-1_00095) | 85881..88046 | - | 2166 | WP_000691812 | DotA/TraY family protein | traY |
| RA126_RS00500 (pSH12sh288-1_00096) | 88121..88690 | - | 570 | WP_000650752 | conjugal transfer protein TraX | - |
| RA126_RS00505 (pSH12sh288-1_00097) | 88687..89892 | - | 1206 | WP_001189547 | conjugal transfer protein TraW | traW |
| RA126_RS00510 (pSH12sh288-1_00098) | 89850..90470 | - | 621 | WP_000286854 | hypothetical protein | traV |
| RA126_RS00515 (pSH12sh288-1_00099) | 90470..93514 | - | 3045 | WP_001024769 | conjugal transfer protein | traU |
| RA126_RS00520 (pSH12sh288-1_00100) | 93809..94627 | - | 819 | WP_000753550 | hypothetical protein | traT |
| RA126_RS00525 (pSH12sh288-1_00102) | 94850..95248 | - | 399 | WP_000088813 | DUF6750 family protein | traR |
| RA126_RS00530 (pSH12sh288-1_00103) | 95295..95825 | - | 531 | WP_000987021 | conjugal transfer protein TraQ | traQ |
| RA126_RS00535 (pSH12sh288-1_00104) | 95822..96535 | - | 714 | WP_000787002 | conjugal transfer protein TraP | traP |
| RA126_RS00540 (pSH12sh288-1_00105) | 96532..97869 | - | 1338 | WP_001272020 | conjugal transfer protein TraO | traO |
| RA126_RS00545 | 97873..98847 | - | 975 | WP_000547386 | DotH/IcmK family type IV secretion protein | traN |
| RA126_RS00550 | 99028..99552 | - | 525 | Protein_109 | DotI/IcmL/TraM family protein | - |
| RA126_RS00555 (pSH12sh288-1_00107) | 99564..99914 | - | 351 | WP_001056367 | hypothetical protein | traL |
| RA126_RS00560 (pSH12sh288-1_00108) | 99931..103992 | - | 4062 | WP_000842456 | LPD7 domain-containing protein | - |
| RA126_RS00565 (pSH12sh288-1_00109) | 104056..104346 | - | 291 | WP_000817801 | IcmT/TraK family protein | traK |