T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 71901..102507
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RA127_RS00390 (pHN08160-1_00075) | 67969..68382 | + | 414 | WP_124983997 | type IV pilus biogenesis protein PilM | - |
| RA127_RS00395 (pHN08160-1_00076) | 68414..70033 | + | 1620 | WP_001035565 | PilN family type IVB pilus formation outer membrane protein | - |
| RA127_RS00400 (pHN08160-1_00077) | 70054..71349 | + | 1296 | WP_000129882 | type 4b pilus protein PilO2 | - |
| RA127_RS00405 (pHN08160-1_00078) | 71339..71797 | + | 459 | WP_000095885 | type IV pilus biogenesis protein PilP | - |
| RA127_RS00410 (pHN08160-1_00079) | 71901..73409 | + | 1509 | WP_000880805 | GspE/PulE family protein | virB11 |
| RA127_RS00415 (pHN08160-1_00080) | 73411..74040 | + | 630 | WP_305847063 | type II secretion system F family protein | - |
| RA127_RS00425 (pHN08160-1_00083) | 75368..75772 | + | 405 | WP_305847064 | type II secretion system F family protein | - |
| RA127_RS00430 (pHN08160-1_00084) | 75834..76370 | + | 537 | WP_000111534 | type 4 pilus major pilin | - |
| RA127_RS00435 (pHN08160-1_00085) | 76415..76900 | + | 486 | WP_001080767 | lytic transglycosylase domain-containing protein | virB1 |
| RA127_RS00440 (pHN08160-1_00086) | 76916..77041 | + | 126 | WP_005082523 | hypothetical protein | - |
| RA127_RS00445 (pHN08160-1_00087) | 77041..77541 | + | 501 | WP_001330556 | prepilin peptidase | - |
| RA127_RS00450 (pHN08160-1_00088) | 77559..78920 | + | 1362 | WP_001168171 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| RA127_RS00455 | 79034..79228 | + | 195 | Protein_90 | integrase | - |
| RA127_RS00460 (pHN08160-1_00089) | 79393..80214 | + | 822 | WP_000845373 | hypothetical protein | traE |
| RA127_RS00465 (pHN08160-1_00090) | 80316..81518 | + | 1203 | WP_000979993 | conjugal transfer protein TraF | - |
| RA127_RS00470 (pHN08160-1_00091) | 81622..82080 | + | 459 | WP_001170111 | DotD/TraH family lipoprotein | - |
| RA127_RS00475 (pHN08160-1_00092) | 82077..82913 | + | 837 | WP_000745049 | type IV secretory system conjugative DNA transfer family protein | traI |
| RA127_RS00480 (pHN08160-1_00093) | 82897..84045 | + | 1149 | WP_000775210 | plasmid transfer ATPase TraJ | virB11 |
| RA127_RS00485 (pHN08160-1_00094) | 84042..84332 | + | 291 | WP_000817801 | IcmT/TraK family protein | traK |
| RA127_RS00490 (pHN08160-1_00095) | 84396..88457 | + | 4062 | WP_000842456 | LPD7 domain-containing protein | - |
| RA127_RS00495 (pHN08160-1_00096) | 88474..88824 | + | 351 | WP_001056367 | hypothetical protein | traL |
| RA127_RS00500 (pHN08160-1_00097) | 88836..89531 | + | 696 | WP_001287545 | DotI/IcmL family type IV secretion protein | traM |
| RA127_RS00505 (pHN08160-1_00098) | 89542..90516 | + | 975 | WP_000547386 | DotH/IcmK family type IV secretion protein | traN |
| RA127_RS00510 | 90520..91856 | + | 1337 | Protein_101 | conjugal transfer protein TraO | - |
| RA127_RS00515 (pHN08160-1_00101) | 91853..92566 | + | 714 | WP_000787002 | conjugal transfer protein TraP | traP |
| RA127_RS00520 (pHN08160-1_00102) | 92563..93093 | + | 531 | WP_000987021 | conjugal transfer protein TraQ | traQ |
| RA127_RS00525 (pHN08160-1_00103) | 93140..93538 | + | 399 | WP_000088813 | DUF6750 family protein | traR |
| RA127_RS00530 (pHN08160-1_00104) | 93595..93846 | + | 252 | WP_001277573 | hypothetical protein | - |
| RA127_RS00535 (pHN08160-1_00105) | 93761..94579 | + | 819 | WP_000753550 | hypothetical protein | traT |
| RA127_RS00540 (pHN08160-1_00106) | 94874..97918 | + | 3045 | WP_001024769 | conjugal transfer protein | traU |
| RA127_RS00545 (pHN08160-1_00107) | 97918..98538 | + | 621 | WP_000286854 | hypothetical protein | traV |
| RA127_RS00550 (pHN08160-1_00108) | 98496..99701 | + | 1206 | WP_001189547 | conjugal transfer protein TraW | traW |
| RA127_RS00555 (pHN08160-1_00109) | 99698..100267 | + | 570 | WP_000650752 | conjugal transfer protein TraX | - |
| RA127_RS00560 (pHN08160-1_00110) | 100342..102507 | + | 2166 | WP_000691812 | DotA/TraY family protein | traY |
| RA127_RS00565 (pHN08160-1_00111) | 102596..103246 | + | 651 | WP_001044247 | plasmid IncI1-type surface exclusion protein ExcA | - |
| RA127_RS00570 (pHN08160-1_00112) | 103520..104482 | + | 963 | WP_241381294 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| RA127_RS00575 (pHN08160-1_00113) | 104593..105105 | + | 513 | WP_001401993 | TnsA endonuclease N-terminal domain-containing protein | - |
| RA127_RS00580 | 105243..105395 | - | 153 | WP_001302699 | Hok/Gef family protein | - |
| RA127_RS00585 (pHN08160-1_00115) | 105725..105967 | + | 243 | WP_001363144 | hypothetical protein | - |