T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 53089..78383
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RA113_RS00315 (pXJ2012249-7_00061) | 50805..53096 | - | 2292 | WP_012783931 | F-type conjugative transfer protein TrbC | - |
| RA113_RS00320 (pXJ2012249-7_00062) | 53089..54159 | - | 1071 | WP_012783932 | IncI1-type conjugal transfer protein TrbB | trbB |
| RA113_RS00325 (pXJ2012249-7_00063) | 54178..55386 | - | 1209 | WP_001703845 | IncI1-type conjugal transfer protein TrbA | trbA |
| RA113_RS00330 (pXJ2012249-7_00064) | 55693..56472 | - | 780 | WP_275450201 | protein FinQ | - |
| RA113_RS00335 (pXJ2012249-7_00065) | 57099..57251 | + | 153 | WP_001387489 | Hok/Gef family protein | - |
| RA113_RS00340 (pXJ2012249-7_00066) | 57323..57574 | - | 252 | WP_001291964 | hypothetical protein | - |
| RA113_RS00345 | 58075..58170 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| RA113_RS00350 | 58235..58519 | - | 285 | WP_014640317 | hypothetical protein | - |
| RA113_RS00355 (pXJ2012249-7_00069) | 58803..59012 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| RA113_RS00360 (pXJ2012249-7_00070) | 59084..59746 | - | 663 | WP_012783935 | plasmid IncI1-type surface exclusion protein ExcA | - |
| RA113_RS00365 (pXJ2012249-7_00071) | 59817..61985 | - | 2169 | WP_015508354 | DotA/TraY family protein | traY |
| RA113_RS00370 (pXJ2012249-7_00072) | 62082..62666 | - | 585 | WP_012783937 | conjugal transfer protein TraX | - |
| RA113_RS00375 (pXJ2012249-7_00073) | 62695..63897 | - | 1203 | WP_012783938 | IncI1-type conjugal transfer protein TraW | traW |
| RA113_RS00380 (pXJ2012249-7_00074) | 63864..64478 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| RA113_RS00385 (pXJ2012249-7_00075) | 64478..67522 | - | 3045 | WP_012783939 | IncI1-type conjugal transfer protein TraU | traU |
| RA113_RS00390 (pXJ2012249-7_00076) | 67612..68412 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| RA113_RS00395 (pXJ2012249-7_00077) | 68396..68584 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| RA113_RS00400 (pXJ2012249-7_00078) | 68648..69052 | - | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| RA113_RS00405 (pXJ2012249-7_00079) | 69103..69630 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| RA113_RS00410 (pXJ2012249-7_00080) | 69630..70334 | - | 705 | WP_001493811 | IncI1-type conjugal transfer protein TraP | traP |
| RA113_RS00415 (pXJ2012249-7_00081) | 70334..71623 | - | 1290 | WP_011264042 | conjugal transfer protein TraO | traO |
| RA113_RS00420 (pXJ2012249-7_00082) | 71626..72609 | - | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| RA113_RS00425 (pXJ2012249-7_00083) | 72620..73312 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| RA113_RS00430 (pXJ2012249-7_00084) | 73309..73656 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| RA113_RS00435 | 73674..77439 | - | 3766 | Protein_86 | LPD7 domain-containing protein | - |
| RA113_RS00440 (pXJ2012249-7_00088) | 77527..78078 | - | 552 | WP_012783942 | phospholipase D family protein | - |
| RA113_RS00445 (pXJ2012249-7_00089) | 78093..78383 | - | 291 | WP_001314267 | hypothetical protein | traK |
| RA113_RS00450 | 78380..79525 | - | 1146 | Protein_89 | plasmid transfer ATPase TraJ | - |
| RA113_RS00455 (pXJ2012249-7_00092) | 79522..80341 | - | 820 | Protein_90 | IncI1-type conjugal transfer lipoprotein TraI | - |