T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 44993..66926
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JDY82_RS29925 (JDY82_29925) | 40756..41451 | - | 696 | WP_254910806 | RepA family replication protein | - |
| JDY82_RS29930 (JDY82_29930) | 41957..42208 | - | 252 | WP_113394424 | hypothetical protein | - |
| JDY82_RS29935 (JDY82_29935) | 42220..42753 | - | 534 | WP_032440594 | phospholipase D family protein | - |
| JDY82_RS29940 (JDY82_29940) | 42799..44991 | - | 2193 | WP_032440593 | F-type conjugative transfer protein TrbC | - |
| JDY82_RS29945 (JDY82_29945) | 44993..46084 | - | 1092 | WP_050597336 | thioredoxin fold domain-containing protein | trbB |
| JDY82_RS29950 (JDY82_29950) | 46095..47513 | - | 1419 | WP_063666705 | hypothetical protein | trbA |
| JDY82_RS29955 (JDY82_29955) | 47615..48238 | - | 624 | WP_032440592 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JDY82_RS29960 (JDY82_29960) | 48304..50448 | - | 2145 | WP_032440591 | DotA/TraY family protein | traY |
| JDY82_RS29965 (JDY82_29965) | 50490..51071 | - | 582 | WP_050597335 | conjugal transfer protein TraX | - |
| JDY82_RS29970 (JDY82_29970) | 51068..52264 | - | 1197 | WP_032440590 | conjugal transfer protein TraW | traW |
| JDY82_RS29975 (JDY82_29975) | 52274..55321 | - | 3048 | WP_032440589 | conjugal transfer protein | traU |
| JDY82_RS29980 (JDY82_29980) | 55331..55894 | - | 564 | WP_045325070 | hypothetical protein | traT |
| JDY82_RS29985 (JDY82_29985) | 55938..56339 | - | 402 | WP_032440588 | DUF6750 family protein | traR |
| JDY82_RS29990 (JDY82_29990) | 56395..56928 | - | 534 | WP_032440587 | conjugal transfer protein TraQ | traQ |
| JDY82_RS29995 (JDY82_29995) | 56938..57657 | - | 720 | WP_050597333 | conjugal transfer protein TraP | traP |
| JDY82_RS30000 (JDY82_30000) | 57664..59004 | - | 1341 | WP_032440586 | conjugal transfer protein TraO | traO |
| JDY82_RS30005 (JDY82_30005) | 59008..60111 | - | 1104 | WP_077264204 | DotH/IcmK family type IV secretion protein | traN |
| JDY82_RS30010 (JDY82_30010) | 60122..60790 | - | 669 | WP_032440585 | DotI/IcmL/TraM family protein | traM |
| JDY82_RS30015 (JDY82_30015) | 60862..61215 | - | 354 | WP_032440584 | hypothetical protein | traL |
| JDY82_RS30020 (JDY82_30020) | 61249..64662 | - | 3414 | WP_052145516 | LPD7 domain-containing protein | - |
| JDY82_RS30025 (JDY82_30025) | 64680..64946 | - | 267 | WP_032440577 | IcmT/TraK family protein | traK |
| JDY82_RS30030 (JDY82_30030) | 64943..66130 | - | 1188 | WP_077255878 | plasmid transfer ATPase TraJ | virB11 |
| JDY82_RS30035 (JDY82_30035) | 66108..66926 | - | 819 | WP_032440576 | type IV secretory system conjugative DNA transfer family protein | traI |
| JDY82_RS30040 (JDY82_30040) | 66923..67387 | - | 465 | WP_225546581 | DotD/TraH family lipoprotein | - |
| JDY82_RS30045 (JDY82_30045) | 67413..67892 | - | 480 | WP_032440574 | lytic transglycosylase domain-containing protein | - |
| JDY82_RS30050 (JDY82_30050) | 67905..68273 | - | 369 | WP_126523558 | hypothetical protein | - |
| JDY82_RS30055 (JDY82_30055) | 68624..68851 | - | 228 | WP_032440573 | hypothetical protein | - |
| JDY82_RS30060 (JDY82_30060) | 69461..70303 | + | 843 | WP_032440572 | helix-turn-helix domain-containing protein | - |
| JDY82_RS30065 (JDY82_30065) | 70363..71292 | + | 930 | WP_032440581 | hypothetical protein | - |
| JDY82_RS30070 (JDY82_30070) | 71285..71779 | + | 495 | WP_032440571 | molybdopterin-dependent oxidoreductase | - |