T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 37758..65937
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JDY82_RS28365 (JDY82_28365) | 33730..34164 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| JDY82_RS28370 (JDY82_28370) | 34161..34880 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| JDY82_RS30735 | 35102..35251 | + | 150 | Protein_46 | plasmid maintenance protein Mok | - |
| JDY82_RS28375 (JDY82_28375) | 35193..35318 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| JDY82_RS28380 (JDY82_28380) | 35637..35933 | - | 297 | Protein_48 | hypothetical protein | - |
| JDY82_RS28385 (JDY82_28385) | 36233..36529 | + | 297 | WP_001272251 | hypothetical protein | - |
| JDY82_RS28390 (JDY82_28390) | 36640..37461 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| JDY82_RS28395 (JDY82_28395) | 37758..38405 | - | 648 | WP_015059008 | transglycosylase SLT domain-containing protein | virB1 |
| JDY82_RS28400 (JDY82_28400) | 38682..39065 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JDY82_RS28405 (JDY82_28405) | 39256..39942 | + | 687 | WP_015059009 | PAS domain-containing protein | - |
| JDY82_RS28410 (JDY82_28410) | 40036..40263 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| JDY82_RS28415 (JDY82_28415) | 40297..40662 | + | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| JDY82_RS28420 (JDY82_28420) | 40677..40988 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| JDY82_RS28425 (JDY82_28425) | 41010..41576 | + | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| JDY82_RS28430 (JDY82_28430) | 41563..42291 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| JDY82_RS28435 (JDY82_28435) | 42291..43718 | + | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| JDY82_RS28440 (JDY82_28440) | 43708..44298 | + | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| JDY82_RS28445 (JDY82_28445) | 44285..44482 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| JDY82_RS28450 (JDY82_28450) | 44494..44745 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| JDY82_RS28455 (JDY82_28455) | 44742..45257 | + | 516 | WP_062955122 | type IV conjugative transfer system lipoprotein TraV | traV |
| JDY82_RS28460 (JDY82_28460) | 45392..45613 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| JDY82_RS28465 (JDY82_28465) | 45773..48400 | + | 2628 | WP_015059012 | type IV secretion system protein TraC | virb4 |
| JDY82_RS28470 (JDY82_28470) | 48397..48783 | + | 387 | WP_015059013 | type-F conjugative transfer system protein TrbI | - |
| JDY82_RS28475 (JDY82_28475) | 48780..49412 | + | 633 | WP_001203735 | type-F conjugative transfer system protein TraW | traW |
| JDY82_RS28480 (JDY82_28480) | 49409..50401 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| JDY82_RS28485 (JDY82_28485) | 50428..50736 | + | 309 | WP_000412447 | hypothetical protein | - |
| JDY82_RS28490 (JDY82_28490) | 50799..51320 | + | 522 | WP_015059014 | hypothetical protein | - |
| JDY82_RS28495 (JDY82_28495) | 51347..51985 | + | 639 | WP_000087532 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| JDY82_RS28500 (JDY82_28500) | 51982..52353 | + | 372 | WP_000056336 | hypothetical protein | - |
| JDY82_RS28505 (JDY82_28505) | 52379..52801 | + | 423 | WP_001229309 | HNH endonuclease signature motif containing protein | - |
| JDY82_RS28510 (JDY82_28510) | 52798..54648 | + | 1851 | WP_015059015 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| JDY82_RS28515 (JDY82_28515) | 54675..54932 | + | 258 | WP_053913405 | conjugal transfer protein TrbE | - |
| JDY82_RS28520 (JDY82_28520) | 54919..55668 | + | 750 | WP_072354014 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| JDY82_RS28525 (JDY82_28525) | 55829..56065 | + | 237 | WP_000270010 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JDY82_RS28530 (JDY82_28530) | 56052..56597 | + | 546 | WP_000059817 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| JDY82_RS28535 (JDY82_28535) | 56587..56901 | + | 315 | WP_001384255 | P-type conjugative transfer protein TrbJ | - |
| JDY82_RS28540 (JDY82_28540) | 56855..57247 | + | 393 | WP_000126338 | F-type conjugal transfer protein TrbF | - |
| JDY82_RS28545 (JDY82_28545) | 57234..58607 | + | 1374 | WP_000944325 | conjugal transfer pilus assembly protein TraH | traH |
| JDY82_RS28550 (JDY82_28550) | 58604..61420 | + | 2817 | WP_015059018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| JDY82_RS28555 (JDY82_28555) | 61453..61974 | + | 522 | WP_000632668 | conjugal transfer entry exclusion protein TraS | - |
| JDY82_RS28560 (JDY82_28560) | 61999..62730 | + | 732 | WP_021559024 | conjugal transfer complement resistance protein TraT | - |
| JDY82_RS28565 (JDY82_28565) | 62933..63670 | + | 738 | WP_015059020 | hypothetical protein | - |
| JDY82_RS28570 (JDY82_28570) | 63721..65937 | + | 2217 | WP_059274178 | type IV conjugative transfer system coupling protein TraD | virb4 |