T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 31116..59349
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQC30_RS25235 (PQC30_25235) | 27083..27517 | + | 435 | WP_032217500 | conjugation system SOS inhibitor PsiB | - |
| PQC30_RS25240 (PQC30_25240) | 27514..28276 | + | 763 | Protein_38 | plasmid SOS inhibition protein A | - |
| PQC30_RS25245 (PQC30_25245) | 28455..28604 | + | 150 | Protein_39 | plasmid maintenance protein Mok | - |
| PQC30_RS25250 (PQC30_25250) | 28546..28671 | + | 126 | WP_223556305 | type I toxin-antitoxin system Hok family toxin | - |
| PQC30_RS25255 (PQC30_25255) | 28891..29121 | + | 231 | WP_001426396 | hypothetical protein | - |
| PQC30_RS25260 (PQC30_25260) | 29119..29292 | - | 174 | Protein_42 | hypothetical protein | - |
| PQC30_RS25265 (PQC30_25265) | 29362..29568 | + | 207 | WP_000547971 | hypothetical protein | - |
| PQC30_RS25270 (PQC30_25270) | 29593..29880 | + | 288 | WP_000107535 | hypothetical protein | - |
| PQC30_RS25275 (PQC30_25275) | 29998..30819 | + | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| PQC30_RS25280 (PQC30_25280) | 31116..31763 | - | 648 | WP_000614935 | transglycosylase SLT domain-containing protein | virB1 |
| PQC30_RS25285 (PQC30_25285) | 32040..32423 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PQC30_RS25290 (PQC30_25290) | 32614..33300 | + | 687 | WP_015059009 | PAS domain-containing protein | - |
| PQC30_RS25295 (PQC30_25295) | 33394..33621 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| PQC30_RS25300 (PQC30_25300) | 33655..34020 | + | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| PQC30_RS25305 (PQC30_25305) | 34035..34346 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| PQC30_RS25310 (PQC30_25310) | 34368..34934 | + | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| PQC30_RS25315 (PQC30_25315) | 34921..35649 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| PQC30_RS25320 (PQC30_25320) | 35649..37076 | + | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PQC30_RS25325 (PQC30_25325) | 37066..37656 | + | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| PQC30_RS25330 (PQC30_25330) | 37643..37840 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| PQC30_RS25335 (PQC30_25335) | 37852..38103 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| PQC30_RS25340 (PQC30_25340) | 38100..38615 | + | 516 | WP_000809902 | type IV conjugative transfer system lipoprotein TraV | traV |
| PQC30_RS25345 (PQC30_25345) | 38750..38971 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| PQC30_RS25350 (PQC30_25350) | 39131..41758 | + | 2628 | WP_015059012 | type IV secretion system protein TraC | virb4 |
| PQC30_RS25355 (PQC30_25355) | 41755..42141 | + | 387 | WP_015059013 | type-F conjugative transfer system protein TrbI | - |
| PQC30_RS25360 (PQC30_25360) | 42138..42770 | + | 633 | WP_001203735 | type-F conjugative transfer system protein TraW | traW |
| PQC30_RS25365 (PQC30_25365) | 42767..43759 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| PQC30_RS25370 (PQC30_25370) | 43786..44094 | + | 309 | WP_000412447 | hypothetical protein | - |
| PQC30_RS25375 (PQC30_25375) | 44157..44678 | + | 522 | WP_015059014 | hypothetical protein | - |
| PQC30_RS25380 (PQC30_25380) | 44705..45343 | + | 639 | WP_000087532 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PQC30_RS25385 (PQC30_25385) | 45340..45711 | + | 372 | WP_000056336 | hypothetical protein | - |
| PQC30_RS25390 (PQC30_25390) | 45737..46159 | + | 423 | WP_001229309 | HNH endonuclease | - |
| PQC30_RS25395 (PQC30_25395) | 46156..48006 | + | 1851 | WP_015059015 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PQC30_RS25400 (PQC30_25400) | 48033..48290 | + | 258 | WP_053913405 | conjugal transfer protein TrbE | - |
| PQC30_RS25405 (PQC30_25405) | 48283..49026 | + | 744 | WP_015059017 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PQC30_RS25410 (PQC30_25410) | 49142..49423 | + | 282 | WP_000549793 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PQC30_RS25415 (PQC30_25415) | 49410..49955 | + | 546 | WP_000059817 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PQC30_RS25420 (PQC30_25420) | 49945..50259 | + | 315 | WP_001384255 | P-type conjugative transfer protein TrbJ | - |
| PQC30_RS25425 (PQC30_25425) | 50213..50605 | + | 393 | WP_000126338 | F-type conjugal transfer protein TrbF | - |
| PQC30_RS25430 (PQC30_25430) | 50592..51965 | + | 1374 | WP_000944325 | conjugal transfer pilus assembly protein TraH | traH |
| PQC30_RS25435 (PQC30_25435) | 51962..54778 | + | 2817 | WP_015059018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PQC30_RS25440 (PQC30_25440) | 54811..55332 | + | 522 | WP_000632668 | conjugal transfer entry exclusion protein TraS | - |
| PQC30_RS25445 (PQC30_25445) | 55357..56088 | + | 732 | WP_021559024 | conjugal transfer complement resistance protein TraT | - |
| PQC30_RS25450 (PQC30_25450) | 56291..57028 | + | 738 | WP_015059020 | hypothetical protein | - |
| PQC30_RS25455 (PQC30_25455) | 57079..59349 | + | 2271 | WP_172694489 | type IV conjugative transfer system coupling protein TraD | prgC |