T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32513..56657
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NM059_RS24055 (NM059_24050) | 28002..29126 | - | 1125 | WP_255245490 | site-specific integrase | - |
| NM059_RS24380 | 30040..30261 | - | 222 | Protein_32 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NM059_RS24060 (NM059_24055) | 30575..31861 | - | 1287 | WP_015057162 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NM059_RS24065 (NM059_24060) | 31874..32509 | - | 636 | WP_000934977 | A24 family peptidase | - |
| NM059_RS24070 (NM059_24065) | 32513..32995 | - | 483 | WP_001258095 | lytic transglycosylase domain-containing protein | virB1 |
| NM059_RS24075 (NM059_24070) | 33061..33618 | - | 558 | WP_000095048 | type 4 pilus major pilin | - |
| NM059_RS24080 (NM059_24075) | 33663..34772 | - | 1110 | WP_000974903 | type II secretion system F family protein | - |
| NM059_RS24085 (NM059_24080) | 34763..36301 | - | 1539 | WP_000466225 | GspE/PulE family protein | virB11 |
| NM059_RS24090 (NM059_24085) | 36326..36820 | - | 495 | WP_000912553 | type IV pilus biogenesis protein PilP | - |
| NM059_RS24095 (NM059_24090) | 36804..38114 | - | 1311 | WP_001454111 | type 4b pilus protein PilO2 | - |
| NM059_RS24100 (NM059_24095) | 38165..39808 | - | 1644 | WP_255245489 | PilN family type IVB pilus formation outer membrane protein | - |
| NM059_RS24105 (NM059_24100) | 39801..40337 | - | 537 | WP_001220543 | sigma 54-interacting transcriptional regulator | virb4 |
| NM059_RS24110 (NM059_24105) | 40384..42342 | - | 1959 | WP_015059539 | type IV secretory system conjugative DNA transfer family protein | - |
| NM059_RS24115 (NM059_24110) | 42358..43413 | - | 1056 | WP_001059977 | P-type DNA transfer ATPase VirB11 | virB11 |
| NM059_RS24120 (NM059_24115) | 43432..44571 | - | 1140 | WP_000790640 | TrbI/VirB10 family protein | virB10 |
| NM059_RS24125 (NM059_24120) | 44561..45262 | - | 702 | WP_000274524 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| NM059_RS24130 (NM059_24125) | 45328..46062 | - | 735 | WP_000432282 | virB8 family protein | virB8 |
| NM059_RS24135 (NM059_24130) | 46062..46196 | - | 135 | WP_000701233 | hypothetical protein | - |
| NM059_RS24140 (NM059_24135) | 46228..48585 | - | 2358 | WP_000548955 | VirB4 family type IV secretion system protein | virb4 |
| NM059_RS24145 (NM059_24140) | 48591..48911 | - | 321 | WP_000362080 | VirB3 family type IV secretion system protein | virB3 |
| NM059_RS24150 (NM059_24145) | 48982..49272 | - | 291 | WP_000865479 | conjugal transfer protein | - |
| NM059_RS24155 (NM059_24150) | 49272..49856 | - | 585 | WP_001177113 | lytic transglycosylase domain-containing protein | virB1 |
| NM059_RS24160 (NM059_24155) | 49877..50275 | - | 399 | WP_001153665 | hypothetical protein | - |
| NM059_RS24165 (NM059_24160) | 50394..50831 | - | 438 | WP_000539665 | type IV pilus biogenesis protein PilM | - |
| NM059_RS24170 (NM059_24165) | 50837..52072 | - | 1236 | WP_015059538 | TcpQ domain-containing protein | - |
| NM059_RS24175 (NM059_24170) | 52075..52374 | - | 300 | WP_000835764 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| NM059_RS24180 (NM059_24175) | 52442..52723 | - | 282 | WP_000638823 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NM059_RS24185 (NM059_24180) | 52713..52964 | - | 252 | WP_000121741 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| NM059_RS24190 (NM059_24185) | 53064..53699 | - | 636 | WP_086722071 | hypothetical protein | - |
| NM059_RS24195 (NM059_24190) | 53747..54556 | + | 810 | WP_172690499 | DUF5710 domain-containing protein | - |
| NM059_RS24200 (NM059_24195) | 54779..55003 | - | 225 | WP_000713562 | EexN family lipoprotein | - |
| NM059_RS24205 (NM059_24200) | 55012..55656 | - | 645 | WP_086722072 | type IV secretion system protein | - |
| NM059_RS24210 (NM059_24205) | 55662..56657 | - | 996 | WP_001028540 | type IV secretion system protein | virB6 |
| NM059_RS24215 (NM059_24210) | 56661..56918 | - | 258 | WP_000739144 | hypothetical protein | - |
| NM059_RS24220 (NM059_24215) | 56915..57217 | - | 303 | WP_001360345 | hypothetical protein | - |
| NM059_RS24225 (NM059_24220) | 57489..58142 | - | 654 | WP_053899054 | hypothetical protein | - |
| NM059_RS24230 (NM059_24225) | 58327..58770 | - | 444 | WP_022645140 | NfeD family protein | - |
| NM059_RS24235 (NM059_24230) | 59150..60103 | - | 954 | WP_072089442 | SPFH domain-containing protein | - |
| NM059_RS24240 (NM059_24235) | 60130..60306 | - | 177 | WP_000753050 | hypothetical protein | - |
| NM059_RS24245 (NM059_24240) | 60299..60514 | - | 216 | WP_001127357 | DUF1187 family protein | - |
| NM059_RS24250 (NM059_24245) | 60507..60959 | - | 453 | WP_000101552 | CaiF/GrlA family transcriptional regulator | - |