T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 28284..37374
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LS45_RS25335 (LS45_25350) | 24315..24548 | - | 234 | WP_001191890 | hypothetical protein | - |
| LS45_RS25340 (LS45_25355) | 24530..25147 | - | 618 | WP_001249395 | hypothetical protein | - |
| LS45_RS28930 (LS45_25360) | 25315..28287 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| LS45_RS25350 (LS45_25365) | 28284..30149 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| LS45_RS25355 (LS45_25370) | 30199..30744 | + | 546 | WP_000228720 | hypothetical protein | - |
| LS45_RS25360 (LS45_25375) | 30701..31330 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| LS45_RS25365 (LS45_25380) | 31340..31786 | + | 447 | WP_000122507 | hypothetical protein | - |
| LS45_RS25370 (LS45_25385) | 31796..32173 | + | 378 | WP_000869297 | hypothetical protein | - |
| LS45_RS25375 (LS45_25390) | 32173..32835 | + | 663 | WP_001231464 | hypothetical protein | - |
| LS45_RS32135 | 33016..33159 | + | 144 | WP_001275801 | hypothetical protein | - |
| LS45_RS25380 (LS45_25395) | 33171..33536 | + | 366 | WP_001052530 | hypothetical protein | - |
| LS45_RS25385 (LS45_25400) | 33681..33962 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| LS45_RS25390 (LS45_25405) | 33959..34585 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| LS45_RS25395 (LS45_25410) | 34569..35486 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| LS45_RS25400 (LS45_25415) | 35486..36799 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| LS45_RS25405 (LS45_25420) | 36796..37374 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| LS45_RS25410 (LS45_25425) | 37378..37770 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |