T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 52742..90448
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
FOC25_RS23300 (FOC25_23310) | 50458..52749 | - | 2292 | WP_001289271 | F-type conjugative transfer protein TrbC | - |
FOC25_RS23305 (FOC25_23315) | 52742..53812 | - | 1071 | WP_000151575 | IncI1-type conjugal transfer protein TrbB | trbB |
FOC25_RS23310 (FOC25_23320) | 53831..55039 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
FOC25_RS23315 (FOC25_23325) | 55331..55483 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
FOC25_RS23320 (FOC25_23330) | 55555..55806 | - | 252 | WP_001291965 | hypothetical protein | - |
FOC25_RS23325 (FOC25_23335) | 56730..56906 | - | 177 | WP_001054900 | hypothetical protein | - |
FOC25_RS23330 (FOC25_23340) | 57298..57507 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
FOC25_RS23335 (FOC25_23345) | 57579..58241 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
FOC25_RS23340 (FOC25_23350) | 58312..60480 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
FOC25_RS23345 (FOC25_23355) | 60577..61161 | - | 585 | WP_001037998 | conjugal transfer protein TraX | - |
FOC25_RS23350 (FOC25_23360) | 61190..62392 | - | 1203 | WP_001189158 | IncI1-type conjugal transfer protein TraW | traW |
FOC25_RS23355 (FOC25_23365) | 62359..62973 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
FOC25_RS23360 (FOC25_23370) | 62973..66017 | - | 3045 | WP_001024752 | IncI1-type conjugal transfer protein TraU | traU |
FOC25_RS23365 (FOC25_23375) | 66107..66907 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
FOC25_RS23370 (FOC25_23380) | 66891..67079 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
FOC25_RS23375 (FOC25_23385) | 67143..67547 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
FOC25_RS23380 (FOC25_23390) | 67598..68125 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
FOC25_RS23385 (FOC25_23395) | 68125..68829 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
FOC25_RS23390 (FOC25_23400) | 68829..70118 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
FOC25_RS23395 (FOC25_23405) | 70121..71104 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
FOC25_RS23400 (FOC25_23410) | 71115..71807 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
FOC25_RS23405 (FOC25_23415) | 71804..72151 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
FOC25_RS23410 (FOC25_23420) | 72169..75936 | - | 3768 | WP_001141535 | LPD7 domain-containing protein | - |
FOC25_RS23415 (FOC25_23425) | 76026..76577 | - | 552 | WP_000014584 | phospholipase D family protein | - |
FOC25_RS23420 (FOC25_23430) | 76592..76882 | - | 291 | WP_001299214 | hypothetical protein | traK |
FOC25_RS23425 (FOC25_23435) | 76879..78027 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
FOC25_RS23430 (FOC25_23440) | 78024..78842 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
FOC25_RS23435 (FOC25_23445) | 78839..79297 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
FOC25_RS23440 (FOC25_23450) | 79692..80276 | - | 585 | WP_000977517 | histidine phosphatase family protein | - |
FOC25_RS23445 (FOC25_23455) | 80336..81538 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
FOC25_RS23450 (FOC25_23460) | 81624..82448 | - | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
FOC25_RS23455 (FOC25_23465) | 82599..83753 | - | 1155 | WP_001139958 | tyrosine-type recombinase/integrase | - |
FOC25_RS24310 (FOC25_23470) | 84339..84560 | + | 222 | Protein_93 | prepilin | - |
FOC25_RS23465 (FOC25_23475) | 84686..85942 | - | 1257 | WP_254879437 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
FOC25_RS23470 (FOC25_23480) | 85942..86598 | - | 657 | WP_001193553 | prepilin peptidase | - |
FOC25_RS23475 (FOC25_23485) | 86583..87143 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
FOC25_RS23480 (FOC25_23490) | 87153..87767 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
FOC25_RS23485 (FOC25_23495) | 87785..88882 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
FOC25_RS23490 (FOC25_23500) | 88895..90448 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
FOC25_RS23495 (FOC25_23505) | 90459..90911 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
FOC25_RS23500 (FOC25_23510) | 90898..92193 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
FOC25_RS23505 (FOC25_23515) | 92186..93868 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
FOC25_RS23510 (FOC25_23520) | 93882..94319 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
FOC25_RS23515 (FOC25_23525) | 94319..95386 | - | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |