T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 37592..66366
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEE98_RS23825 (IEE98_23790) | 32929..33333 | - | 405 | WP_032104594 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IEE98_RS23830 (IEE98_23795) | 33567..33797 | + | 231 | WP_004118481 | hypothetical protein | - |
| IEE98_RS23835 (IEE98_23800) | 34318..34743 | + | 426 | WP_016529597 | antirestriction protein | - |
| IEE98_RS23840 (IEE98_23805) | 34980..35234 | + | 255 | WP_004152754 | DNA polymerase III subunit theta | - |
| IEE98_RS23845 (IEE98_23810) | 35269..35586 | + | 318 | WP_004118473 | hypothetical protein | - |
| IEE98_RS23850 (IEE98_23815) | 36376..37197 | + | 822 | WP_032104544 | DUF932 domain-containing protein | - |
| IEE98_RS23855 (IEE98_23820) | 37230..37559 | + | 330 | WP_265710078 | DUF5983 family protein | - |
| IEE98_RS23860 (IEE98_23825) | 37592..38077 | - | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| IEE98_RS23865 (IEE98_23830) | 38468..38884 | + | 417 | WP_074181767 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| IEE98_RS23870 (IEE98_23835) | 39084..39803 | + | 720 | WP_171819460 | conjugal transfer protein TrbJ | - |
| IEE98_RS23875 (IEE98_23840) | 39936..40142 | + | 207 | WP_171773970 | TraY domain-containing protein | - |
| IEE98_RS23880 (IEE98_23845) | 40204..40572 | + | 369 | WP_032104546 | type IV conjugative transfer system pilin TraA | - |
| IEE98_RS23885 (IEE98_23850) | 40586..40891 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| IEE98_RS23890 (IEE98_23855) | 40911..41477 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| IEE98_RS23895 (IEE98_23860) | 41464..42204 | + | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| IEE98_RS23900 (IEE98_23865) | 42204..43628 | + | 1425 | WP_180350930 | F-type conjugal transfer pilus assembly protein TraB | traB |
| IEE98_RS23905 (IEE98_23870) | 43701..44285 | + | 585 | WP_020277945 | type IV conjugative transfer system lipoprotein TraV | traV |
| IEE98_RS23910 (IEE98_23875) | 44866..45156 | + | 291 | WP_032104549 | hypothetical protein | - |
| IEE98_RS23915 (IEE98_23880) | 45180..45398 | + | 219 | WP_004195468 | hypothetical protein | - |
| IEE98_RS23920 (IEE98_23885) | 45399..45729 | + | 331 | Protein_51 | hypothetical protein | - |
| IEE98_RS23925 (IEE98_23890) | 45774..46178 | + | 405 | WP_032104551 | hypothetical protein | - |
| IEE98_RS23930 (IEE98_23895) | 46220..46516 | + | 297 | WP_265710083 | FmdE family protein | - |
| IEE98_RS23935 (IEE98_23900) | 46541..46940 | + | 400 | Protein_54 | hypothetical protein | - |
| IEE98_RS23940 (IEE98_23905) | 47012..49651 | + | 2640 | WP_265710085 | type IV secretion system protein TraC | virb4 |
| IEE98_RS23945 (IEE98_23910) | 49651..50040 | + | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| IEE98_RS23950 (IEE98_23915) | 50040..50675 | + | 636 | WP_020325113 | type-F conjugative transfer system protein TraW | traW |
| IEE98_RS23955 (IEE98_23920) | 50710..51111 | + | 402 | Protein_58 | hypothetical protein | - |
| IEE98_RS23960 (IEE98_23925) | 51108..52097 | + | 990 | WP_032104558 | conjugal transfer pilus assembly protein TraU | traU |
| IEE98_RS23965 (IEE98_23930) | 52373..53020 | + | 648 | WP_032104559 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| IEE98_RS23970 (IEE98_23935) | 53079..55034 | + | 1956 | WP_265710088 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| IEE98_RS23975 (IEE98_23940) | 55066..55320 | + | 255 | WP_032104561 | conjugal transfer protein TrbE | - |
| IEE98_RS23980 (IEE98_23945) | 55298..55546 | + | 249 | WP_032104562 | hypothetical protein | - |
| IEE98_RS23985 (IEE98_23950) | 55559..55885 | + | 327 | WP_004144402 | hypothetical protein | - |
| IEE98_RS23990 (IEE98_23955) | 55906..56658 | + | 753 | WP_032104565 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| IEE98_RS23995 (IEE98_23960) | 56669..56908 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IEE98_RS24000 (IEE98_23965) | 56880..57437 | + | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| IEE98_RS24005 (IEE98_23970) | 57483..57926 | + | 444 | WP_014343488 | F-type conjugal transfer protein TrbF | - |
| IEE98_RS24010 (IEE98_23975) | 57904..59283 | + | 1380 | WP_180350934 | conjugal transfer pilus assembly protein TraH | traH |
| IEE98_RS24015 (IEE98_23980) | 59283..62126 | + | 2844 | WP_265710092 | conjugal transfer mating-pair stabilization protein TraG | traG |
| IEE98_RS24020 (IEE98_23985) | 62137..62661 | + | 525 | WP_015632518 | conjugal transfer entry exclusion protein | - |
| IEE98_RS24025 (IEE98_23990) | 62970..63701 | + | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| IEE98_RS24030 (IEE98_23995) | 64063..66366 | + | 2304 | WP_257608640 | type IV conjugative transfer system coupling protein TraD | virb4 |