T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 103991..131262
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PGC29_RS24510 (PGC29_24510) | 99925..100413 | + | 489 | WP_001135407 | hypothetical protein | - |
| PGC29_RS24515 (PGC29_24515) | 101068..101808 | + | 741 | WP_001541566 | carbonic anhydrase | - |
| PGC29_RS24520 (PGC29_24520) | 102074..102778 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| PGC29_RS24525 (PGC29_24525) | 102831..103880 | + | 1050 | Protein_126 | UvrD-helicase domain-containing protein | - |
| PGC29_RS24530 (PGC29_24530) | 103991..105031 | + | 1041 | WP_031222909 | conjugal transfer protein TraF | traF |
| PGC29_RS24535 (PGC29_24535) | 105033..106466 | + | 1434 | WP_058650168 | conjugal transfer protein TraH | traH |
| PGC29_RS24540 (PGC29_24540) | 106479..107498 | + | 1020 | Protein_129 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PGC29_RS24545 (PGC29_24545) | 107550..108254 | - | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| PGC29_RS24550 (PGC29_24550) | 108304..108996 | + | 693 | Protein_131 | DUF4158 domain-containing protein | - |
| PGC29_RS24555 (PGC29_24555) | 109060..109764 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| PGC29_RS24560 (PGC29_24560) | 109833..110483 | + | 651 | WP_161647215 | hypothetical protein | - |
| PGC29_RS24565 (PGC29_24565) | 110606..111466 | + | 861 | WP_302510792 | hypothetical protein | - |
| PGC29_RS24570 (PGC29_24570) | 111505..114309 | - | 2805 | WP_302510794 | conjugal transfer mating pair stabilization protein TraN | traN |
| PGC29_RS24575 (PGC29_24575) | 114427..115410 | - | 984 | WP_232074448 | TraU family protein | traU |
| PGC29_RS24580 (PGC29_24580) | 115431..116102 | - | 672 | WP_121926691 | EAL domain-containing protein | - |
| PGC29_RS24585 (PGC29_24585) | 116099..117364 | - | 1266 | WP_069142401 | TrbC family F-type conjugative pilus assembly protein | traW |
| PGC29_RS24590 (PGC29_24590) | 117327..117857 | - | 531 | WP_021293639 | S26 family signal peptidase | - |
| PGC29_RS24595 (PGC29_24595) | 117854..118171 | - | 318 | WP_011872858 | hypothetical protein | - |
| PGC29_RS24600 (PGC29_24600) | 118186..120633 | - | 2448 | WP_302510797 | type IV secretion system protein TraC | virb4 |
| PGC29_RS24605 (PGC29_24605) | 120630..121337 | - | 708 | WP_021293638 | DsbC family protein | - |
| PGC29_RS24610 (PGC29_24610) | 121486..126972 | - | 5487 | WP_302510798 | Ig-like domain-containing protein | - |
| PGC29_RS24615 (PGC29_24615) | 127173..127556 | - | 384 | WP_050584476 | TraA family conjugative transfer protein | - |
| PGC29_RS24620 (PGC29_24620) | 127569..128147 | - | 579 | WP_025887070 | type IV conjugative transfer system lipoprotein TraV | traV |
| PGC29_RS24625 (PGC29_24625) | 128144..129457 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| PGC29_RS24630 (PGC29_24630) | 129457..130374 | - | 918 | WP_025989283 | type-F conjugative transfer system secretin TraK | traK |
| PGC29_RS24635 (PGC29_24635) | 130358..130984 | - | 627 | WP_025989284 | TraE/TraK family type IV conjugative transfer system protein | traE |
| PGC29_RS24640 (PGC29_24640) | 130981..131262 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| PGC29_RS24645 (PGC29_24645) | 131407..131772 | - | 366 | WP_025989285 | hypothetical protein | - |
| PGC29_RS24650 (PGC29_24650) | 131786..131929 | - | 144 | WP_186295989 | hypothetical protein | - |
| PGC29_RS24655 (PGC29_24655) | 132109..132771 | - | 663 | WP_025989286 | hypothetical protein | - |
| PGC29_RS24660 (PGC29_24660) | 132771..133148 | - | 378 | WP_025989287 | hypothetical protein | - |
| PGC29_RS24665 (PGC29_24665) | 133158..133604 | - | 447 | WP_025989288 | hypothetical protein | - |
| PGC29_RS24670 (PGC29_24670) | 133748..134452 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |