T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 70720..99717
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPY21_RS26205 (NPY21_26205) | 70720..73032 | - | 2313 | WP_032495268 | type IV conjugative transfer system coupling protein TraD | virb4 |
| NPY21_RS26210 (NPY21_26210) | 73161..73850 | - | 690 | WP_004198206 | hypothetical protein | - |
| NPY21_RS26215 (NPY21_26215) | 74042..74773 | - | 732 | WP_004152622 | conjugal transfer complement resistance protein TraT | - |
| NPY21_RS26220 (NPY21_26220) | 74957..75505 | - | 549 | WP_004152623 | conjugal transfer entry exclusion protein TraS | - |
| NPY21_RS26225 (NPY21_26225) | 75518..78367 | - | 2850 | WP_004152624 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NPY21_RS26230 (NPY21_26230) | 78367..79746 | - | 1380 | WP_004165169 | conjugal transfer pilus assembly protein TraH | traH |
| NPY21_RS26235 (NPY21_26235) | 79724..80167 | - | 444 | WP_004152679 | F-type conjugal transfer protein TrbF | - |
| NPY21_RS26240 (NPY21_26240) | 80213..80770 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NPY21_RS26245 (NPY21_26245) | 80742..80981 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NPY21_RS26250 (NPY21_26250) | 80992..81744 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NPY21_RS26255 (NPY21_26255) | 81765..82091 | - | 327 | WP_004152676 | hypothetical protein | - |
| NPY21_RS26260 (NPY21_26260) | 82104..82352 | - | 249 | WP_004152675 | hypothetical protein | - |
| NPY21_RS26265 (NPY21_26265) | 82330..82584 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| NPY21_RS26270 (NPY21_26270) | 82616..84571 | - | 1956 | WP_004152673 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NPY21_RS26275 (NPY21_26275) | 84630..85268 | - | 639 | WP_004152672 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NPY21_RS26280 (NPY21_26280) | 85281..86270 | - | 990 | WP_011977785 | conjugal transfer pilus assembly protein TraU | traU |
| NPY21_RS26285 (NPY21_26285) | 86267..86656 | - | 390 | WP_004152508 | hypothetical protein | - |
| NPY21_RS26290 (NPY21_26290) | 86698..87324 | - | 627 | WP_004152507 | type-F conjugative transfer system protein TraW | traW |
| NPY21_RS26295 (NPY21_26295) | 87324..87713 | - | 390 | WP_004152506 | type-F conjugative transfer system protein TrbI | - |
| NPY21_RS26300 (NPY21_26300) | 87713..90352 | - | 2640 | WP_004152505 | type IV secretion system protein TraC | virb4 |
| NPY21_RS26305 (NPY21_26305) | 90424..90822 | - | 399 | WP_011977783 | hypothetical protein | - |
| NPY21_RS26310 (NPY21_26310) | 90830..91219 | - | 390 | WP_004153076 | hypothetical protein | - |
| NPY21_RS26315 (NPY21_26315) | 91262..91666 | - | 405 | WP_004152503 | hypothetical protein | - |
| NPY21_RS26320 (NPY21_26320) | 91733..92044 | - | 312 | WP_004152502 | hypothetical protein | - |
| NPY21_RS26325 (NPY21_26325) | 92045..92263 | - | 219 | WP_004152501 | hypothetical protein | - |
| NPY21_RS26330 (NPY21_26330) | 92369..92779 | - | 411 | WP_004152499 | hypothetical protein | - |
| NPY21_RS26335 (NPY21_26335) | 92911..93495 | - | 585 | WP_004161368 | type IV conjugative transfer system lipoprotein TraV | traV |
| NPY21_RS26340 (NPY21_26340) | 93609..95033 | - | 1425 | WP_004155033 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NPY21_RS26345 (NPY21_26345) | 95033..95773 | - | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| NPY21_RS26350 (NPY21_26350) | 95760..96326 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| NPY21_RS26355 (NPY21_26355) | 96346..96651 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NPY21_RS26360 (NPY21_26360) | 96665..97033 | - | 369 | WP_004152496 | type IV conjugative transfer system pilin TraA | - |
| NPY21_RS26365 (NPY21_26365) | 97087..97473 | - | 387 | WP_004152495 | TraY domain-containing protein | - |
| NPY21_RS26370 (NPY21_26370) | 97552..98238 | - | 687 | WP_004152494 | transcriptional regulator TraJ family protein | - |
| NPY21_RS26375 (NPY21_26375) | 98412..98810 | - | 399 | WP_004152493 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NPY21_RS26380 (NPY21_26380) | 99232..99717 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| NPY21_RS26385 (NPY21_26385) | 99750..100079 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| NPY21_RS26390 (NPY21_26390) | 100112..100933 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| NPY21_RS26395 (NPY21_26395) | 101753..102586 | - | 834 | WP_004152751 | N-6 DNA methylase | - |
| NPY21_RS26400 (NPY21_26400) | 102637..102783 | - | 147 | WP_004152750 | hypothetical protein | - |
| NPY21_RS26405 (NPY21_26405) | 102878..103225 | - | 348 | WP_004152749 | hypothetical protein | - |
| NPY21_RS26410 (NPY21_26410) | 103282..103635 | - | 354 | WP_004152748 | hypothetical protein | - |
| NPY21_RS26415 (NPY21_26415) | 104265..104615 | - | 351 | WP_004153414 | hypothetical protein | - |