T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12259..56084
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL735_RS25890 (NL735_25890) | 7321..8388 | + | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |
| NL735_RS25895 (NL735_25895) | 8388..8825 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| NL735_RS25900 (NL735_25900) | 8839..10521 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| NL735_RS25905 (NL735_25905) | 10514..11809 | + | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| NL735_RS25910 (NL735_25910) | 11796..12248 | + | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| NL735_RS25915 (NL735_25915) | 12259..13812 | + | 1554 | WP_167651944 | GspE/PulE family protein | virB11 |
| NL735_RS25920 (NL735_25920) | 13825..14922 | + | 1098 | WP_001208805 | type II secretion system F family protein | - |
| NL735_RS25925 (NL735_25925) | 14940..15554 | + | 615 | WP_000959786 | type 4 pilus major pilin | - |
| NL735_RS25930 (NL735_25930) | 15564..16124 | + | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| NL735_RS25935 (NL735_25935) | 16109..16765 | + | 657 | WP_001193553 | prepilin peptidase | - |
| NL735_RS25940 (NL735_25940) | 16765..18057 | + | 1293 | WP_001417545 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NL735_RS25945 (NL735_25945) | 18054..18302 | - | 249 | WP_001349157 | hypothetical protein | - |
| NL735_RS25950 (NL735_25950) | 19540..19824 | - | 285 | WP_187642572 | pilus assembly protein PilV | - |
| NL735_RS25955 (NL735_25955) | 19823..20977 | + | 1155 | WP_001139958 | tyrosine-type recombinase/integrase | - |
| NL735_RS25960 (NL735_25960) | 21128..21952 | + | 825 | WP_001238929 | conjugal transfer protein TraE | traE |
| NL735_RS25965 (NL735_25965) | 22038..23240 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| NL735_RS25970 (NL735_25970) | 23300..23884 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| NL735_RS25975 (NL735_25975) | 24279..24737 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NL735_RS25980 (NL735_25980) | 24734..25552 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NL735_RS25985 (NL735_25985) | 25549..26697 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| NL735_RS25990 (NL735_25990) | 26694..26984 | + | 291 | WP_001299214 | hypothetical protein | traK |
| NL735_RS25995 (NL735_25995) | 26999..27550 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| NL735_RS26000 (NL735_26000) | 27640..31407 | + | 3768 | WP_023518849 | LPD7 domain-containing protein | - |
| NL735_RS26005 (NL735_26005) | 31425..31772 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| NL735_RS26010 (NL735_26010) | 31769..32461 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| NL735_RS26015 (NL735_26015) | 32472..33455 | + | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| NL735_RS26020 (NL735_26020) | 33458..34747 | + | 1290 | WP_167651943 | conjugal transfer protein TraO | traO |
| NL735_RS26025 (NL735_26025) | 34747..35451 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| NL735_RS26030 (NL735_26030) | 35451..35978 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NL735_RS26035 (NL735_26035) | 36029..36433 | + | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| NL735_RS26040 (NL735_26040) | 36497..36685 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| NL735_RS26045 (NL735_26045) | 36669..37469 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| NL735_RS26050 (NL735_26050) | 37559..40603 | + | 3045 | WP_023518848 | IncI1-type conjugal transfer protein TraU | traU |
| NL735_RS26055 (NL735_26055) | 40603..41217 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| NL735_RS26060 (NL735_26060) | 41184..42386 | + | 1203 | WP_254535113 | IncI1-type conjugal transfer protein TraW | traW |
| NL735_RS26065 (NL735_26065) | 42415..42999 | + | 585 | WP_254535114 | IncI1-type conjugal transfer protein TraX | - |
| NL735_RS26070 (NL735_26070) | 43096..45264 | + | 2169 | WP_023518847 | DotA/TraY family protein | traY |
| NL735_RS26075 (NL735_26075) | 45335..45997 | + | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NL735_RS26080 (NL735_26080) | 46069..46278 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| NL735_RS26085 (NL735_26085) | 46670..46846 | + | 177 | WP_001054897 | hypothetical protein | - |
| NL735_RS26450 | 46911..47006 | - | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| NL735_RS26095 (NL735_26095) | 47507..47758 | + | 252 | WP_001291964 | hypothetical protein | - |
| NL735_RS26100 (NL735_26100) | 47830..47982 | - | 153 | WP_001387489 | Hok/Gef family protein | - |
| NL735_RS26105 (NL735_26105) | 48303..48677 | + | 375 | WP_223349261 | hypothetical protein | - |
| NL735_RS26110 (NL735_26110) | 48830..50092 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| NL735_RS26115 (NL735_26115) | 50416..51561 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| NL735_RS26120 (NL735_26120) | 51655..52188 | + | 534 | WP_001221666 | lipocalin family protein | - |
| NL735_RS26125 (NL735_26125) | 52185..52502 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| NL735_RS26130 (NL735_26130) | 52698..53480 | + | 783 | WP_227496365 | protein FinQ | - |
| NL735_RS26135 (NL735_26135) | 53787..54995 | + | 1209 | WP_011264049 | IncI1-type conjugal transfer protein TrbA | trbA |
| NL735_RS26140 (NL735_26140) | 55014..56084 | + | 1071 | WP_011264050 | IncI1-type conjugal transfer protein TrbB | trbB |
| NL735_RS26145 (NL735_26145) | 56077..58368 | + | 2292 | WP_011264051 | F-type conjugative transfer protein TrbC | - |