T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 38984..77283
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL737_RS24410 (NL737_24410) | 36700..38991 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| NL737_RS24415 (NL737_24415) | 38984..40054 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| NL737_RS24420 (NL737_24420) | 40073..41281 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| NL737_RS24425 (NL737_24425) | 41573..41725 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| NL737_RS24430 (NL737_24430) | 41797..42048 | - | 252 | WP_001291964 | hypothetical protein | - |
| NL737_RS24750 | 42549..42644 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| NL737_RS24440 (NL737_24440) | 42709..42885 | - | 177 | WP_001054904 | hypothetical protein | - |
| NL737_RS24445 (NL737_24445) | 43277..43486 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| NL737_RS24450 (NL737_24450) | 43558..44220 | - | 663 | WP_000653334 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NL737_RS24455 (NL737_24455) | 44285..46447 | - | 2163 | WP_000698351 | DotA/TraY family protein | traY |
| NL737_RS24460 (NL737_24460) | 46544..47128 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| NL737_RS24465 (NL737_24465) | 47157..48359 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| NL737_RS24470 (NL737_24470) | 48326..48940 | - | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| NL737_RS24475 (NL737_24475) | 48940..51984 | - | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| NL737_RS24480 (NL737_24480) | 52074..52874 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| NL737_RS24485 (NL737_24485) | 52858..53046 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| NL737_RS24490 (NL737_24490) | 53110..53514 | - | 405 | WP_000086957 | IncI1-type conjugal transfer protein TraR | traR |
| NL737_RS24495 (NL737_24495) | 53565..54092 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NL737_RS24500 (NL737_24500) | 54092..54796 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| NL737_RS24505 (NL737_24505) | 54796..56085 | - | 1290 | WP_001272005 | conjugal transfer protein TraO | traO |
| NL737_RS24510 (NL737_24510) | 56088..57071 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| NL737_RS24515 (NL737_24515) | 57082..57774 | - | 693 | WP_000138548 | DotI/IcmL family type IV secretion protein | traM |
| NL737_RS24520 (NL737_24520) | 57771..58118 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| NL737_RS24525 (NL737_24525) | 58136..61903 | - | 3768 | WP_001141529 | LPD7 domain-containing protein | - |
| NL737_RS24530 (NL737_24530) | 61993..62544 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| NL737_RS24535 (NL737_24535) | 62559..62849 | - | 291 | WP_001299214 | hypothetical protein | traK |
| NL737_RS24540 (NL737_24540) | 62846..63994 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| NL737_RS24545 (NL737_24545) | 63991..64809 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NL737_RS24550 (NL737_24550) | 64806..65264 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NL737_RS24555 (NL737_24555) | 65659..66243 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| NL737_RS24560 (NL737_24560) | 66303..67505 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| NL737_RS24565 (NL737_24565) | 67590..68414 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| NL737_RS24570 (NL737_24570) | 68565..69719 | - | 1155 | WP_001139957 | tyrosine-type recombinase/integrase | - |
| NL737_RS24575 (NL737_24575) | 69718..70002 | + | 285 | WP_187642572 | pilus assembly protein PilV | - |
| NL737_RS24580 (NL737_24580) | 71240..71488 | + | 249 | WP_001349157 | hypothetical protein | - |
| NL737_RS24585 (NL737_24585) | 71485..72777 | - | 1293 | WP_001417545 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NL737_RS24590 (NL737_24590) | 72777..73433 | - | 657 | WP_254520617 | prepilin peptidase | - |
| NL737_RS24595 (NL737_24595) | 73418..73978 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| NL737_RS24600 (NL737_24600) | 73988..74602 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| NL737_RS24605 (NL737_24605) | 74620..75717 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| NL737_RS24610 (NL737_24610) | 75730..77283 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| NL737_RS24615 (NL737_24615) | 77294..77746 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| NL737_RS24620 (NL737_24620) | 77733..79028 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| NL737_RS24625 (NL737_24625) | 79021..80703 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| NL737_RS24630 (NL737_24630) | 80717..81154 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| NL737_RS24635 (NL737_24635) | 81154..82221 | - | 1068 | WP_044707330 | type IV pilus biogenesis lipoprotein PilL | - |