T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 818..14327
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NL734_RS24860 (NL734_24860) | 308..673 | + | 366 | WP_001052530 | hypothetical protein | - |
NL734_RS24865 (NL734_24865) | 818..1099 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
NL734_RS24870 (NL734_24870) | 1096..1722 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
NL734_RS24875 (NL734_24875) | 1706..2623 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
NL734_RS24880 (NL734_24880) | 2623..3936 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
NL734_RS24885 (NL734_24885) | 3933..4511 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
NL734_RS24890 (NL734_24890) | 4515..4907 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
NL734_RS24895 (NL734_24895) | 5192..6454 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
NL734_RS24900 (NL734_24900) | 6778..7923 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
NL734_RS24905 (NL734_24905) | 8017..8550 | + | 534 | WP_001221666 | lipocalin family protein | - |
NL734_RS24910 (NL734_24910) | 8547..8864 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
NL734_RS24915 (NL734_24915) | 9121..9312 | + | 192 | Protein_11 | hypothetical protein | - |
NL734_RS24920 (NL734_24920) | 9473..11284 | + | 1812 | WP_254521175 | hypothetical protein | - |
NL734_RS24925 (NL734_24925) | 11281..13146 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
NL734_RS24930 (NL734_24930) | 13196..13741 | + | 546 | WP_000228720 | hypothetical protein | - |
NL734_RS24935 (NL734_24935) | 13698..14327 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
NL734_RS24940 (NL734_24940) | 14337..14783 | + | 447 | WP_000122507 | hypothetical protein | - |
NL734_RS24945 (NL734_24945) | 14793..15170 | + | 378 | WP_000869297 | hypothetical protein | - |
NL734_RS24950 (NL734_24950) | 15170..15832 | + | 663 | WP_001231464 | hypothetical protein | - |