T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 13970..50797
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTV38_RS00055 | 10046..10486 | + | 441 | WP_233609726 | type IV pilus biogenesis protein PilM | - |
| HTV38_RS00060 | 10501..12177 | + | 1677 | WP_040231333 | PilN family type IVB pilus formation outer membrane protein | - |
| HTV38_RS00065 | 12179..13483 | + | 1305 | WP_153754047 | type 4b pilus protein PilO2 | - |
| HTV38_RS00070 | 13467..13967 | + | 501 | WP_153754046 | type IV pilus biogenesis protein PilP | - |
| HTV38_RS00075 | 13970..15529 | + | 1560 | WP_153754045 | GspE/PulE family protein | virB11 |
| HTV38_RS00080 | 15522..16616 | + | 1095 | WP_040231337 | type II secretion system F family protein | - |
| HTV38_RS00085 | 16630..17244 | + | 615 | WP_052463753 | type 4 pilus major pilin | - |
| HTV38_RS00090 | 17329..17811 | + | 483 | WP_123924696 | lytic transglycosylase domain-containing protein | virB1 |
| HTV38_RS00095 | 17796..18470 | + | 675 | WP_040231341 | prepilin peptidase | - |
| HTV38_RS00100 | 18467..19690 | + | 1224 | WP_153754044 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HTV38_RS00105 | 20299..20595 | - | 297 | WP_153754043 | hypothetical protein | - |
| HTV38_RS00110 | 20845..21162 | - | 318 | WP_172694112 | hypothetical protein | - |
| HTV38_RS00115 | 21409..22569 | + | 1161 | WP_228553303 | site-specific integrase | - |
| HTV38_RS00120 | 22589..23065 | + | 477 | WP_123924625 | hypothetical protein | - |
| HTV38_RS00125 | 23210..24046 | + | 837 | WP_040231179 | hypothetical protein | traE |
| HTV38_RS00130 | 24149..25357 | + | 1209 | WP_153754042 | conjugal transfer protein TraF | - |
| HTV38_RS00135 | 25490..25963 | + | 474 | WP_172694113 | DotD/TraH family lipoprotein | - |
| HTV38_RS00140 | 25960..26766 | + | 807 | WP_153754041 | type IV secretory system conjugative DNA transfer family protein | traI |
| HTV38_RS00145 | 26778..27938 | + | 1161 | WP_153754040 | plasmid transfer ATPase TraJ | virB11 |
| HTV38_RS00150 | 27935..28222 | + | 288 | WP_040231189 | hypothetical protein | traK |
| HTV38_RS00155 | 28251..28802 | + | 552 | WP_172694114 | hypothetical protein | - |
| HTV38_RS00610 | 29164..32379 | + | 3216 | Protein_30 | LPD7 domain-containing protein | - |
| HTV38_RS00165 | 33669..34028 | + | 360 | WP_228553289 | conjugal transfer protein | traL |
| HTV38_RS00170 | 34025..34726 | + | 702 | WP_040231195 | DotI/IcmL/TraM family protein | traM |
| HTV38_RS00175 | 34737..35720 | + | 984 | WP_123924694 | DotH/IcmK family type IV secretion protein | traN |
| HTV38_RS00180 | 35720..37036 | + | 1317 | WP_153754037 | conjugal transfer protein TraO | traO |
| HTV38_RS00185 | 37020..37790 | + | 771 | WP_052463736 | conjugal transfer protein TraP | traP |
| HTV38_RS00190 | 37790..38314 | + | 525 | WP_040231200 | conjugal transfer protein TraQ | traQ |
| HTV38_RS00195 | 38348..38752 | + | 405 | WP_040231201 | DUF6750 family protein | traR |
| HTV38_RS00200 | 38936..39667 | + | 732 | WP_228553287 | conjugal transfer protein TraT | traT |
| HTV38_RS00205 | 39739..42792 | + | 3054 | WP_153754035 | ATP-binding protein | traU |
| HTV38_RS00210 | 43374..44576 | + | 1203 | WP_153754033 | conjugal transfer protein TraW | traW |
| HTV38_RS00215 | 44573..45115 | + | 543 | WP_153754032 | conjugal transfer protein TraX | - |
| HTV38_RS00220 | 45173..47332 | + | 2160 | WP_172694115 | DotA/TraY family protein | traY |
| HTV38_RS00225 | 47394..48026 | + | 633 | WP_153754030 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HTV38_RS00230 | 48337..49545 | + | 1209 | WP_153754029 | conjugal transfer protein TrbA | trbA |
| HTV38_RS00235 | 49598..50797 | + | 1200 | WP_153754028 | thioredoxin fold domain-containing protein | trbB |
| HTV38_RS00240 | 50801..53101 | + | 2301 | WP_115490298 | F-type conjugative transfer protein TrbC | - |
| HTV38_RS00245 | 53174..53443 | + | 270 | WP_115490299 | hypothetical protein | - |
| HTV38_RS00250 | 53506..54015 | - | 510 | WP_172694116 | type II toxin-antitoxin system YafO family toxin | - |
| HTV38_RS00255 | 54042..54275 | - | 234 | WP_040231217 | hypothetical protein | - |