T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 27113..69449
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH62_RS16820 (LMH62_16830) | 22175..23242 | + | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |
| LMH62_RS16825 (LMH62_16835) | 23242..23679 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| LMH62_RS16830 (LMH62_16840) | 23693..25375 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| LMH62_RS16835 (LMH62_16845) | 25368..26663 | + | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| LMH62_RS16840 (LMH62_16850) | 26650..27102 | + | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| LMH62_RS16845 (LMH62_16855) | 27113..28666 | + | 1554 | WP_001579763 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LMH62_RS16850 (LMH62_16860) | 28679..29776 | + | 1098 | WP_001208805 | type II secretion system F family protein | - |
| LMH62_RS16855 (LMH62_16865) | 29794..30408 | + | 615 | WP_000959786 | type 4 pilus major pilin | - |
| LMH62_RS16860 (LMH62_16870) | 30418..30978 | + | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| LMH62_RS16865 (LMH62_16875) | 30963..31619 | + | 657 | WP_001193553 | prepilin peptidase | - |
| LMH62_RS16870 (LMH62_16880) | 31619..32911 | + | 1293 | WP_001417545 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| LMH62_RS25700 | 34065..34220 | - | 156 | WP_001302705 | hypothetical protein | - |
| LMH62_RS16875 (LMH62_16885) | 34329..34754 | + | 426 | WP_000422741 | transposase | - |
| LMH62_RS16880 (LMH62_16890) | 34751..35101 | + | 351 | WP_000624722 | IS66 family insertion sequence element accessory protein TnpB | - |
| LMH62_RS16885 (LMH62_16895) | 35132..36745 | + | 1614 | WP_000080200 | IS66-like element ISEc23 family transposase | - |
| LMH62_RS16890 (LMH62_16900) | 36865..37218 | - | 354 | WP_001393368 | hypothetical protein | - |
| LMH62_RS16895 (LMH62_16905) | 37217..38371 | + | 1155 | WP_001139958 | site-specific integrase | - |
| LMH62_RS16900 (LMH62_16910) | 38522..39346 | + | 825 | WP_001238929 | conjugal transfer protein TraE | traE |
| LMH62_RS16905 (LMH62_16915) | 39432..40634 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| LMH62_RS16910 (LMH62_16920) | 40694..41278 | + | 585 | WP_001579766 | histidine phosphatase family protein | - |
| LMH62_RS16915 (LMH62_16925) | 41673..42131 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| LMH62_RS16920 (LMH62_16930) | 42128..42946 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| LMH62_RS16925 (LMH62_16935) | 42943..44091 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| LMH62_RS16930 (LMH62_16940) | 44088..44378 | + | 291 | WP_001372180 | hypothetical protein | traK |
| LMH62_RS16935 (LMH62_16945) | 44393..44944 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| LMH62_RS16940 (LMH62_16950) | 45034..48801 | + | 3768 | WP_001579768 | LPD7 domain-containing protein | - |
| LMH62_RS16945 (LMH62_16955) | 48819..49166 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| LMH62_RS16950 (LMH62_16960) | 49163..49855 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| LMH62_RS16955 (LMH62_16965) | 49866..50849 | + | 984 | WP_001579769 | IncI1-type conjugal transfer protein TraN | traN |
| LMH62_RS16960 (LMH62_16970) | 50852..52141 | + | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| LMH62_RS16965 (LMH62_16975) | 52141..52845 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| LMH62_RS16970 (LMH62_16980) | 52845..53372 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| LMH62_RS16975 (LMH62_16985) | 53423..53827 | + | 405 | WP_001579770 | DUF6750 family protein | traR |
| LMH62_RS16980 (LMH62_16990) | 53891..54079 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| LMH62_RS16985 (LMH62_16995) | 54063..54863 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| LMH62_RS16990 (LMH62_17000) | 54953..57997 | + | 3045 | WP_001024752 | IncI1-type conjugal transfer protein TraU | traU |
| LMH62_RS16995 (LMH62_17005) | 57997..58611 | + | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| LMH62_RS17000 (LMH62_17010) | 58578..59780 | + | 1203 | WP_001579773 | IncI1-type conjugal transfer protein TraW | traW |
| LMH62_RS17005 (LMH62_17015) | 59809..60393 | + | 585 | WP_001579774 | IncI1-type conjugal transfer protein TraX | - |
| LMH62_RS17010 (LMH62_17020) | 60490..62658 | + | 2169 | WP_000698360 | IncI1-type conjugal transfer membrane protein TraY | traY |
| LMH62_RS17015 (LMH62_17025) | 62734..63348 | + | 615 | WP_000578649 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LMH62_RS17020 (LMH62_17030) | 63446..63655 | + | 210 | WP_001140545 | hemolysin expression modulator Hha | - |
| LMH62_RS17025 (LMH62_17035) | 63864..64040 | + | 177 | WP_001054900 | hypothetical protein | - |
| LMH62_RS17030 (LMH62_17040) | 64964..65215 | + | 252 | WP_001291968 | hypothetical protein | - |
| LMH62_RS17035 (LMH62_17045) | 65287..65439 | - | 153 | WP_001303307 | Hok/Gef family protein | - |
| LMH62_RS17040 (LMH62_17050) | 66066..66845 | + | 780 | WP_275450201 | protein FinQ | - |
| LMH62_RS17045 (LMH62_17055) | 67152..68360 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| LMH62_RS17050 (LMH62_17060) | 68379..69449 | + | 1071 | WP_000151582 | IncI1-type conjugal transfer protein TrbB | trbB |
| LMH62_RS17055 (LMH62_17065) | 69442..71733 | + | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |