T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 192690..231579
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXT36_RS23390 (EXT36_23875) | 187752..188819 | + | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |
| EXT36_RS23395 (EXT36_23880) | 188819..189256 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| EXT36_RS23400 (EXT36_23885) | 189270..190952 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| EXT36_RS23405 (EXT36_23890) | 190945..192240 | + | 1296 | WP_058649964 | type 4b pilus protein PilO2 | - |
| EXT36_RS23410 (EXT36_23895) | 192227..192679 | + | 453 | WP_058649963 | type IV pilus biogenesis protein PilP | - |
| EXT36_RS23415 (EXT36_23900) | 192690..194243 | + | 1554 | WP_000362204 | GspE/PulE family protein | virB11 |
| EXT36_RS23420 (EXT36_23905) | 194256..195341 | + | 1086 | WP_001208803 | type II secretion system F family protein | - |
| EXT36_RS23425 (EXT36_23910) | 195358..195972 | + | 615 | WP_000908228 | type 4 pilus major pilin | - |
| EXT36_RS23430 (EXT36_23915) | 195982..196542 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| EXT36_RS23435 (EXT36_23920) | 196527..197183 | + | 657 | WP_001193551 | A24 family peptidase | - |
| EXT36_RS23440 (EXT36_23925) | 197171..198607 | + | 1437 | WP_015058913 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| EXT36_RS24680 (EXT36_23930) | 198604..198828 | - | 225 | Protein_190 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| EXT36_RS24685 | 199101..199370 | - | 270 | Protein_191 | hypothetical protein | - |
| EXT36_RS23450 (EXT36_23940) | 199410..200564 | + | 1155 | WP_001139955 | tyrosine-type recombinase/integrase | - |
| EXT36_RS23455 (EXT36_23945) | 200715..201539 | + | 825 | WP_058649947 | conjugal transfer protein TraE | traE |
| EXT36_RS23460 (EXT36_23950) | 201625..202827 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| EXT36_RS23465 (EXT36_23955) | 202887..203471 | + | 585 | WP_000977520 | histidine phosphatase family protein | - |
| EXT36_RS23470 (EXT36_23960) | 203866..204324 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| EXT36_RS23475 (EXT36_23965) | 204321..205139 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| EXT36_RS23480 (EXT36_23970) | 205136..206284 | + | 1149 | WP_001024976 | plasmid transfer ATPase TraJ | virB11 |
| EXT36_RS23485 (EXT36_23975) | 206281..206571 | + | 291 | WP_001299214 | hypothetical protein | traK |
| EXT36_RS23490 (EXT36_23980) | 206586..207137 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| EXT36_RS23495 (EXT36_23985) | 207227..210994 | + | 3768 | WP_058649948 | LPD7 domain-containing protein | - |
| EXT36_RS23500 (EXT36_23990) | 211012..211359 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| EXT36_RS23505 (EXT36_23995) | 211356..212048 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| EXT36_RS23510 (EXT36_24000) | 212059..213042 | + | 984 | WP_021513963 | IncI1-type conjugal transfer protein TraN | traN |
| EXT36_RS23515 (EXT36_24005) | 213045..214334 | + | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| EXT36_RS23520 (EXT36_24010) | 214334..215038 | + | 705 | WP_023155244 | IncI1-type conjugal transfer protein TraP | traP |
| EXT36_RS23525 (EXT36_24015) | 215038..215565 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| EXT36_RS23530 (EXT36_24020) | 215616..216020 | + | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| EXT36_RS23535 (EXT36_24025) | 216084..216272 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| EXT36_RS23540 (EXT36_24030) | 216256..217056 | + | 801 | WP_001164792 | IncI1-type conjugal transfer protein TraT | traT |
| EXT36_RS23545 (EXT36_24035) | 217146..220190 | + | 3045 | WP_001024776 | IncI1-type conjugal transfer protein TraU | traU |
| EXT36_RS23550 (EXT36_24040) | 220190..220804 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| EXT36_RS23555 (EXT36_24045) | 220771..221973 | + | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| EXT36_RS23560 (EXT36_24050) | 222002..222586 | + | 585 | WP_001037996 | IncI1-type conjugal transfer protein TraX | - |
| EXT36_RS23565 (EXT36_24055) | 222683..224851 | + | 2169 | WP_058649949 | DotA/TraY family protein | traY |
| EXT36_RS23570 (EXT36_24060) | 224922..225584 | + | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EXT36_RS23575 (EXT36_24065) | 225656..225865 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| EXT36_RS23580 | 226257..226433 | + | 177 | WP_001054897 | hypothetical protein | - |
| EXT36_RS24580 | 226498..226593 | - | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| EXT36_RS23590 (EXT36_24075) | 227094..227345 | + | 252 | WP_001291964 | hypothetical protein | - |
| EXT36_RS23595 (EXT36_24080) | 227417..227569 | - | 153 | WP_001387489 | Hok/Gef family protein | - |
| EXT36_RS23600 (EXT36_24085) | 228196..228975 | + | 780 | WP_275450201 | protein FinQ | - |
| EXT36_RS23605 (EXT36_24090) | 229282..230490 | + | 1209 | WP_001383960 | IncI1-type conjugal transfer protein TrbA | trbA |
| EXT36_RS23610 (EXT36_24095) | 230509..231579 | + | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| EXT36_RS23615 (EXT36_24100) | 231572..233863 | + | 2292 | WP_001289275 | F-type conjugative transfer protein TrbC | - |