T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 162051..200940
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXT33_RS23400 (EXT33_23895) | 157113..158180 | + | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |
| EXT33_RS23405 (EXT33_23900) | 158180..158617 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| EXT33_RS23410 (EXT33_23905) | 158631..160313 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| EXT33_RS23415 (EXT33_23910) | 160306..161601 | + | 1296 | WP_058649964 | type 4b pilus protein PilO2 | - |
| EXT33_RS23420 (EXT33_23915) | 161588..162040 | + | 453 | WP_058649963 | type IV pilus biogenesis protein PilP | - |
| EXT33_RS23425 (EXT33_23920) | 162051..163604 | + | 1554 | WP_000362204 | GspE/PulE family protein | virB11 |
| EXT33_RS23430 (EXT33_23925) | 163617..164702 | + | 1086 | WP_001208803 | type II secretion system F family protein | - |
| EXT33_RS23435 (EXT33_23930) | 164719..165333 | + | 615 | WP_000908228 | type 4 pilus major pilin | - |
| EXT33_RS23440 (EXT33_23935) | 165343..165903 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| EXT33_RS23445 (EXT33_23940) | 165888..166544 | + | 657 | WP_001193551 | A24 family peptidase | - |
| EXT33_RS23450 (EXT33_23945) | 166532..167968 | + | 1437 | WP_015058913 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| EXT33_RS24820 (EXT33_23950) | 167965..168189 | - | 225 | Protein_168 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| EXT33_RS24825 | 168462..168731 | - | 270 | Protein_169 | hypothetical protein | - |
| EXT33_RS23460 (EXT33_23960) | 168771..169925 | + | 1155 | WP_001139955 | tyrosine-type recombinase/integrase | - |
| EXT33_RS23465 (EXT33_23965) | 170076..170900 | + | 825 | WP_058649947 | conjugal transfer protein TraE | traE |
| EXT33_RS23470 (EXT33_23970) | 170986..172188 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| EXT33_RS23475 (EXT33_23975) | 172248..172832 | + | 585 | WP_000977520 | histidine phosphatase family protein | - |
| EXT33_RS23480 (EXT33_23980) | 173227..173685 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| EXT33_RS23485 (EXT33_23985) | 173682..174500 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| EXT33_RS23490 (EXT33_23990) | 174497..175645 | + | 1149 | WP_001024976 | plasmid transfer ATPase TraJ | virB11 |
| EXT33_RS23495 (EXT33_23995) | 175642..175932 | + | 291 | WP_001299214 | hypothetical protein | traK |
| EXT33_RS23500 (EXT33_24000) | 175947..176498 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| EXT33_RS23505 (EXT33_24005) | 176588..180355 | + | 3768 | WP_058649948 | LPD7 domain-containing protein | - |
| EXT33_RS23510 (EXT33_24010) | 180373..180720 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| EXT33_RS23515 (EXT33_24015) | 180717..181409 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| EXT33_RS23520 (EXT33_24020) | 181420..182403 | + | 984 | WP_021513963 | IncI1-type conjugal transfer protein TraN | traN |
| EXT33_RS23525 (EXT33_24025) | 182406..183695 | + | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| EXT33_RS23530 (EXT33_24030) | 183695..184399 | + | 705 | WP_023155244 | IncI1-type conjugal transfer protein TraP | traP |
| EXT33_RS23535 (EXT33_24035) | 184399..184926 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| EXT33_RS23540 (EXT33_24040) | 184977..185381 | + | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| EXT33_RS23545 (EXT33_24045) | 185445..185633 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| EXT33_RS23550 (EXT33_24050) | 185617..186417 | + | 801 | WP_001164792 | IncI1-type conjugal transfer protein TraT | traT |
| EXT33_RS23555 (EXT33_24055) | 186507..189551 | + | 3045 | WP_001024776 | IncI1-type conjugal transfer protein TraU | traU |
| EXT33_RS23560 (EXT33_24060) | 189551..190165 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| EXT33_RS23565 (EXT33_24065) | 190132..191334 | + | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| EXT33_RS23570 (EXT33_24070) | 191363..191947 | + | 585 | WP_001037996 | IncI1-type conjugal transfer protein TraX | - |
| EXT33_RS23575 (EXT33_24075) | 192044..194212 | + | 2169 | WP_058649949 | DotA/TraY family protein | traY |
| EXT33_RS23580 (EXT33_24080) | 194283..194945 | + | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EXT33_RS23585 (EXT33_24085) | 195017..195226 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| EXT33_RS23590 | 195618..195794 | + | 177 | WP_001054897 | hypothetical protein | - |
| EXT33_RS24705 | 195859..195954 | - | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| EXT33_RS23600 (EXT33_24095) | 196455..196706 | + | 252 | WP_001291964 | hypothetical protein | - |
| EXT33_RS23605 (EXT33_24100) | 196778..196930 | - | 153 | WP_001387489 | Hok/Gef family protein | - |
| EXT33_RS23610 (EXT33_24105) | 197557..198336 | + | 780 | WP_275450201 | protein FinQ | - |
| EXT33_RS23615 (EXT33_24110) | 198643..199851 | + | 1209 | WP_001383960 | IncI1-type conjugal transfer protein TrbA | trbA |
| EXT33_RS23620 (EXT33_24115) | 199870..200940 | + | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| EXT33_RS23625 (EXT33_24120) | 200933..203224 | + | 2292 | WP_001289275 | F-type conjugative transfer protein TrbC | - |