T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 188291..227180
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXT35_RS23445 (EXT35_23955) | 183353..184420 | + | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |
| EXT35_RS23450 (EXT35_23960) | 184420..184857 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| EXT35_RS23455 (EXT35_23965) | 184871..186553 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| EXT35_RS23460 (EXT35_23970) | 186546..187841 | + | 1296 | WP_058649964 | type 4b pilus protein PilO2 | - |
| EXT35_RS23465 (EXT35_23975) | 187828..188280 | + | 453 | WP_058649963 | type IV pilus biogenesis protein PilP | - |
| EXT35_RS23470 (EXT35_23980) | 188291..189844 | + | 1554 | WP_000362204 | GspE/PulE family protein | virB11 |
| EXT35_RS23475 (EXT35_23985) | 189857..190942 | + | 1086 | WP_001208803 | type II secretion system F family protein | - |
| EXT35_RS23480 (EXT35_23990) | 190959..191573 | + | 615 | WP_000908228 | type 4 pilus major pilin | - |
| EXT35_RS23485 (EXT35_23995) | 191583..192143 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| EXT35_RS23490 (EXT35_24000) | 192128..192784 | + | 657 | WP_001193551 | A24 family peptidase | - |
| EXT35_RS23495 (EXT35_24005) | 192784..194076 | + | 1293 | WP_039719938 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| EXT35_RS23500 (EXT35_24010) | 194073..194321 | - | 249 | WP_001349157 | hypothetical protein | - |
| EXT35_RS24820 | 194702..194971 | - | 270 | Protein_187 | hypothetical protein | - |
| EXT35_RS23505 (EXT35_24020) | 195011..196165 | + | 1155 | WP_001139955 | tyrosine-type recombinase/integrase | - |
| EXT35_RS23510 (EXT35_24025) | 196316..197140 | + | 825 | WP_058649947 | conjugal transfer protein TraE | traE |
| EXT35_RS23515 (EXT35_24030) | 197226..198428 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| EXT35_RS23520 (EXT35_24035) | 198488..199072 | + | 585 | WP_000977520 | histidine phosphatase family protein | - |
| EXT35_RS23525 (EXT35_24040) | 199467..199925 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| EXT35_RS23530 (EXT35_24045) | 199922..200740 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| EXT35_RS23535 (EXT35_24050) | 200737..201885 | + | 1149 | WP_001024976 | plasmid transfer ATPase TraJ | virB11 |
| EXT35_RS23540 (EXT35_24055) | 201882..202172 | + | 291 | WP_001299214 | hypothetical protein | traK |
| EXT35_RS23545 (EXT35_24060) | 202187..202738 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| EXT35_RS23550 (EXT35_24065) | 202828..206595 | + | 3768 | WP_058649948 | LPD7 domain-containing protein | - |
| EXT35_RS23555 (EXT35_24070) | 206613..206960 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| EXT35_RS23560 (EXT35_24075) | 206957..207649 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| EXT35_RS23565 (EXT35_24080) | 207660..208643 | + | 984 | WP_021513963 | IncI1-type conjugal transfer protein TraN | traN |
| EXT35_RS23570 (EXT35_24085) | 208646..209935 | + | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| EXT35_RS23575 (EXT35_24090) | 209935..210639 | + | 705 | WP_023155244 | IncI1-type conjugal transfer protein TraP | traP |
| EXT35_RS23580 (EXT35_24095) | 210639..211166 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| EXT35_RS23585 (EXT35_24100) | 211217..211621 | + | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| EXT35_RS23590 (EXT35_24105) | 211685..211873 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| EXT35_RS23595 (EXT35_24110) | 211857..212657 | + | 801 | WP_001164792 | IncI1-type conjugal transfer protein TraT | traT |
| EXT35_RS23600 (EXT35_24115) | 212747..215791 | + | 3045 | WP_001024776 | IncI1-type conjugal transfer protein TraU | traU |
| EXT35_RS23605 (EXT35_24120) | 215791..216405 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| EXT35_RS23610 (EXT35_24125) | 216372..217574 | + | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| EXT35_RS23615 (EXT35_24130) | 217603..218187 | + | 585 | WP_001037996 | IncI1-type conjugal transfer protein TraX | - |
| EXT35_RS23620 (EXT35_24135) | 218284..220452 | + | 2169 | WP_058649949 | DotA/TraY family protein | traY |
| EXT35_RS23625 (EXT35_24140) | 220523..221185 | + | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EXT35_RS23630 (EXT35_24145) | 221257..221466 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| EXT35_RS23635 | 221858..222034 | + | 177 | WP_001054897 | hypothetical protein | - |
| EXT35_RS24690 | 222099..222194 | - | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| EXT35_RS23645 (EXT35_24155) | 222695..222946 | + | 252 | WP_001291964 | hypothetical protein | - |
| EXT35_RS23650 (EXT35_24160) | 223018..223170 | - | 153 | WP_001387489 | Hok/Gef family protein | - |
| EXT35_RS23655 (EXT35_24165) | 223797..224576 | + | 780 | WP_275450201 | protein FinQ | - |
| EXT35_RS23660 (EXT35_24170) | 224883..226091 | + | 1209 | WP_001383960 | IncI1-type conjugal transfer protein TrbA | trbA |
| EXT35_RS23665 (EXT35_24175) | 226110..227180 | + | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| EXT35_RS23670 (EXT35_24180) | 227173..229464 | + | 2292 | WP_001289275 | F-type conjugative transfer protein TrbC | - |