T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1526..28869
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIT29_RS24795 (CIT29_24760) | 129..563 | - | 435 | Protein_0 | CPBP family intramembrane glutamate endopeptidase | - |
| CIT29_RS24800 (CIT29_24765) | 643..1026 | + | 384 | WP_019725042 | DUF1496 domain-containing protein | - |
| CIT29_RS24805 (CIT29_24770) | 1131..1526 | + | 396 | WP_004187436 | lytic transglycosylase domain-containing protein | - |
| CIT29_RS24810 (CIT29_24775) | 1526..2833 | + | 1308 | WP_015059988 | hypothetical protein | trbA |
| CIT29_RS24815 (CIT29_24780) | 2844..3794 | + | 951 | WP_004206886 | DsbC family protein | trbB |
| CIT29_RS24820 (CIT29_24785) | 3807..5894 | + | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| CIT29_RS31405 | 5945..6040 | - | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| CIT29_RS24825 (CIT29_24790) | 7263..8318 | - | 1056 | WP_015060006 | plasmid replication initiator RepA | - |
| CIT29_RS24830 (CIT29_24795) | 8614..8856 | - | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |
| CIT29_RS24835 (CIT29_24800) | 8925..9578 | - | 654 | WP_015060005 | hypothetical protein | - |
| CIT29_RS24840 (CIT29_24805) | 9580..11775 | - | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| CIT29_RS24845 (CIT29_24810) | 11768..12364 | - | 597 | WP_015060003 | hypothetical protein | - |
| CIT29_RS24850 (CIT29_24815) | 12361..13569 | - | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| CIT29_RS24855 (CIT29_24820) | 13566..16616 | - | 3051 | WP_094965870 | conjugal transfer protein | traU |
| CIT29_RS24860 (CIT29_24825) | 16613..17107 | - | 495 | WP_004187480 | hypothetical protein | - |
| CIT29_RS24865 (CIT29_24830) | 17153..17542 | - | 390 | WP_004187479 | DUF6750 family protein | traR |
| CIT29_RS24870 (CIT29_24835) | 17559..18089 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| CIT29_RS24875 (CIT29_24840) | 18113..18817 | - | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| CIT29_RS24880 (CIT29_24845) | 18829..20178 | - | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| CIT29_RS24885 (CIT29_24850) | 20190..21341 | - | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| CIT29_RS24890 (CIT29_24855) | 21350..22063 | - | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| CIT29_RS24895 (CIT29_24860) | 22131..22541 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| CIT29_RS24900 (CIT29_24865) | 22528..22725 | + | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| CIT29_RS24905 (CIT29_24870) | 22726..23238 | - | 513 | WP_011091071 | hypothetical protein | traL |
| CIT29_RS31120 | 23204..26641 | - | 3438 | WP_235851935 | LPD7 domain-containing protein | - |
| CIT29_RS24915 (CIT29_24880) | 26666..26926 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| CIT29_RS24920 (CIT29_24885) | 26916..28079 | - | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| CIT29_RS24925 (CIT29_24890) | 28090..28869 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| CIT29_RS24930 (CIT29_24895) | 28866..29366 | - | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| CIT29_RS24935 (CIT29_24900) | 29380..31359 | - | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| CIT29_RS31125 | 31346..31873 | - | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| CIT29_RS24945 (CIT29_24910) | 31908..32303 | + | 396 | WP_019725163 | hypothetical protein | - |
| CIT29_RS24950 (CIT29_24915) | 32805..33341 | - | 537 | WP_004187332 | hypothetical protein | - |
| CIT29_RS24955 (CIT29_24920) | 33474..33785 | - | 312 | WP_004187333 | hypothetical protein | - |