T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 45492..70596
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTQ01_RS00335 (pCf587_0072) | 41532..41765 | - | 234 | WP_001191893 | hypothetical protein | - |
| HTQ01_RS00340 (pCf587_0073) | 41747..42364 | - | 618 | WP_012766323 | hypothetical protein | - |
| HTQ01_RS00345 (pCf587_0074) | 42532..45495 | + | 2964 | WP_172692072 | MobH family relaxase | - |
| HTQ01_RS00350 (pCf587_0075) | 45492..47357 | + | 1866 | WP_172692073 | conjugative transfer system coupling protein TraD | virb4 |
| HTQ01_RS00355 (pCf587_0076) | 47368..47952 | + | 585 | WP_000332867 | hypothetical protein | - |
| HTQ01_RS00360 (pCf587_0077) | 47909..48538 | + | 630 | WP_057521214 | DUF4400 domain-containing protein | tfc7 |
| HTQ01_RS00365 | 48549..48995 | + | 447 | WP_099360028 | hypothetical protein | - |
| HTQ01_RS00370 (pCf587_0079) | 49005..49382 | + | 378 | WP_000869260 | hypothetical protein | - |
| HTQ01_RS00375 (pCf587_0080) | 49382..50044 | + | 663 | WP_057521212 | hypothetical protein | - |
| HTQ01_RS00380 (pCf587_0081) | 50223..50366 | + | 144 | WP_023356351 | hypothetical protein | - |
| HTQ01_RS00385 (pCf587_0082) | 50379..50726 | + | 348 | WP_001102160 | hypothetical protein | - |
| HTQ01_RS00390 (pCf587_0083) | 50869..51150 | + | 282 | WP_000805626 | type IV conjugative transfer system protein TraL | traL |
| HTQ01_RS00395 (pCf587_0084) | 51147..51773 | + | 627 | WP_057521211 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HTQ01_RS00400 (pCf587_0085) | 51757..52674 | + | 918 | WP_012766326 | type-F conjugative transfer system secretin TraK | traK |
| HTQ01_RS00405 (pCf587_0086) | 52671..53987 | + | 1317 | WP_057521210 | TraB/VirB10 family protein | traB |
| HTQ01_RS00410 (pCf587_0087) | 53984..54562 | + | 579 | WP_039272410 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTQ01_RS00415 (pCf587_0088) | 54566..54958 | + | 393 | WP_012766327 | TraA family conjugative transfer protein | - |
| HTQ01_RS00420 (pCf587_0089) | 55159..60645 | + | 5487 | WP_057521209 | Ig-like domain-containing protein | - |
| HTQ01_RS00425 (pCf587_0090) | 60794..61501 | + | 708 | WP_001259344 | DsbC family protein | - |
| HTQ01_RS00430 (pCf587_0091) | 61498..63945 | + | 2448 | WP_012766329 | type IV secretion system protein TraC | virb4 |
| HTQ01_RS00435 (pCf587_0092) | 63960..64277 | + | 318 | WP_000364398 | hypothetical protein | - |
| HTQ01_RS00440 (pCf587_0093) | 64274..64804 | + | 531 | WP_000672456 | S26 family signal peptidase | - |
| HTQ01_RS00445 (pCf587_0094) | 64767..66035 | + | 1269 | WP_001553264 | TrbC family F-type conjugative pilus assembly protein | traW |
| HTQ01_RS00450 (pCf587_0095) | 66032..66709 | + | 678 | WP_012766331 | EAL domain-containing protein | - |
| HTQ01_RS00455 (pCf587_0096) | 66703..67707 | + | 1005 | WP_000911304 | TraU family protein | traU |
| HTQ01_RS00460 (pCf587_0097) | 67846..70596 | + | 2751 | WP_234805065 | conjugal transfer mating pair stabilization protein TraN | traN |
| HTQ01_RS00465 (pCf587_0098) | 70634..71494 | - | 861 | WP_012766333 | hypothetical protein | - |
| HTQ01_RS00470 (pCf587_0099) | 71606..72256 | - | 651 | WP_000796641 | hypothetical protein | - |
| HTQ01_RS00475 (pCf587_0100) | 72547..72867 | + | 321 | WP_012766334 | hypothetical protein | - |
| HTQ01_RS00480 (pCf587_0101) | 73178..73363 | + | 186 | WP_001186892 | hypothetical protein | - |
| HTQ01_RS00485 (pCf587_0102) | 73584..74552 | + | 969 | WP_001553257 | AAA family ATPase | - |
| HTQ01_RS00490 (pCf587_0103) | 74693..75469 | + | 777 | WP_234805066 | hypothetical protein | - |