T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 41835..67026
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PM64421a_RS00240 (PM64421a_00047) | 37860..38093 | - | 234 | WP_001191892 | hypothetical protein | - |
| PM64421a_RS00245 (PM64421a_00048) | 38075..38692 | - | 618 | WP_001249396 | hypothetical protein | - |
| PM64421a_RS00250 (PM64421a_00049) | 38860..41838 | + | 2979 | WP_001337757 | MobH family relaxase | - |
| PM64421a_RS00255 (PM64421a_00050) | 41835..43700 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| PM64421a_RS00260 (PM64421a_00051) | 43711..44295 | + | 585 | WP_000332866 | hypothetical protein | - |
| PM64421a_RS00265 (PM64421a_00052) | 44252..44881 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| PM64421a_RS00270 (PM64421a_00053) | 44891..45337 | + | 447 | WP_000122506 | hypothetical protein | - |
| PM64421a_RS00275 (PM64421a_00054) | 45347..45724 | + | 378 | WP_000869261 | hypothetical protein | - |
| PM64421a_RS00280 (PM64421a_00055) | 45724..46386 | + | 663 | WP_001231463 | hypothetical protein | - |
| PM64421a_RS00285 (PM64421a_00056) | 46567..46710 | + | 144 | WP_001275801 | hypothetical protein | - |
| PM64421a_RS00290 (PM64421a_00057) | 46722..47087 | + | 366 | WP_001052531 | hypothetical protein | - |
| PM64421a_RS00295 (PM64421a_00058) | 47232..47513 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| PM64421a_RS00300 (PM64421a_00059) | 47510..48136 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| PM64421a_RS00305 (PM64421a_00060) | 48120..49037 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| PM64421a_RS00310 (PM64421a_00061) | 49037..50350 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| PM64421a_RS00315 (PM64421a_00062) | 50347..50925 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| PM64421a_RS00320 (PM64421a_00063) | 50929..51321 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| PM64421a_RS00325 (PM64421a_00064) | 51522..57053 | + | 5532 | WP_085281193 | Ig-like domain-containing protein | - |
| PM64421a_RS00330 (PM64421a_00065) | 57202..57909 | + | 708 | WP_001259347 | DsbC family protein | - |
| PM64421a_RS00335 (PM64421a_00066) | 57906..60353 | + | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| PM64421a_RS00340 (PM64421a_00067) | 60368..60685 | + | 318 | WP_000351984 | hypothetical protein | - |
| PM64421a_RS00345 (PM64421a_00068) | 60682..61212 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| PM64421a_RS00350 (PM64421a_00069) | 61175..62440 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| PM64421a_RS00355 (PM64421a_00070) | 62437..63108 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| PM64421a_RS00360 (PM64421a_00071) | 63108..64112 | + | 1005 | WP_043940352 | TraU family protein | traU |
| PM64421a_RS00365 (PM64421a_00072) | 64228..67026 | + | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| PM64421a_RS00370 (PM64421a_00073) | 67065..67925 | - | 861 | WP_000709517 | hypothetical protein | - |
| PM64421a_RS00375 (PM64421a_00074) | 68048..68689 | - | 642 | WP_000796664 | hypothetical protein | - |
| PM64421a_RS00380 (PM64421a_00075) | 68983..69303 | + | 321 | WP_000547566 | hypothetical protein | - |
| PM64421a_RS00385 (PM64421a_00076) | 69607..69792 | + | 186 | WP_001186917 | hypothetical protein | - |
| PM64421a_RS00390 (PM64421a_00077) | 70012..70980 | + | 969 | WP_000085162 | AAA family ATPase | - |
| PM64421a_RS00395 (PM64421a_00078) | 70991..71899 | + | 909 | WP_000739139 | hypothetical protein | - |