T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42664..52773
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTO54_RS00230 (pNDM-BJ03_39) | 37787..39049 | - | 1263 | WP_000517490 | ATP-binding protein | - |
| HTO54_RS00235 (pNDM-BJ03_40) | 39132..39626 | - | 495 | WP_001215543 | thermonuclease family protein | - |
| HTO54_RS00240 (pNDM-BJ03_41) | 39623..39949 | - | 327 | WP_004208538 | hypothetical protein | - |
| HTO54_RS00245 (pNDM-BJ03_42) | 40035..40349 | - | 315 | WP_000754496 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HTO54_RS00250 (pNDM-BJ03_43) | 40437..40829 | - | 393 | WP_000738524 | cag pathogenicity island Cag12 family protein | - |
| HTO54_RS00255 (pNDM-BJ03_44) | 40826..42661 | - | 1836 | WP_000053822 | type IV secretory system conjugative DNA transfer family protein | - |
| HTO54_RS00260 (pNDM-BJ03_45) | 42664..43698 | - | 1035 | WP_000650512 | P-type DNA transfer ATPase VirB11 | virB11 |
| HTO54_RS00265 | 43695..43892 | - | 198 | WP_000629109 | DNA-binding protein | - |
| HTO54_RS00270 (pNDM-BJ03_46) | 43894..45108 | - | 1215 | WP_001295060 | VirB10/TraB/TrbI family type IV secretion system protein | virB10 |
| HTO54_RS00275 (pNDM-BJ03_47) | 45105..46034 | - | 930 | WP_000783386 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HTO54_RS00280 (pNDM-BJ03_48) | 46040..46768 | - | 729 | WP_004199085 | virB8 family protein | virB8 |
| HTO54_RS00285 (pNDM-BJ03_49) | 46963..48018 | - | 1056 | WP_000235886 | type IV secretion system protein | virB6 |
| HTO54_RS00290 (pNDM-BJ03_50) | 48030..48287 | - | 258 | WP_000759841 | EexN family lipoprotein | - |
| HTO54_RS00295 (pNDM-BJ03_51) | 48297..49067 | - | 771 | WP_000716326 | type IV secretion system protein | - |
| HTO54_RS00300 (pNDM-BJ03_52) | 49077..51830 | - | 2754 | WP_015060057 | VirB3 family type IV secretion system protein | virb4 |
| HTO54_RS00305 (pNDM-BJ03_53) | 51855..52145 | - | 291 | WP_000916156 | TrbC/VirB2 family protein | virB2 |
| HTO54_RS00310 (pNDM-BJ03_54) | 52129..52773 | - | 645 | WP_000953538 | lytic transglycosylase domain-containing protein | virB1 |
| HTO54_RS00315 | 52819..53055 | - | 237 | WP_001348696 | hypothetical protein | - |
| HTO54_RS00320 (pNDM-BJ03_55) | 53006..53656 | - | 651 | WP_004208545 | transcription termination/antitermination NusG family protein | - |
| HTO54_RS00325 (pNDM-BJ03_56) | 53868..55028 | - | 1161 | WP_004199101 | MobP1 family relaxase | - |
| HTO54_RS00330 (pNDM-BJ03_57) | 55031..55576 | - | 546 | WP_001348698 | DNA distortion polypeptide 1 | - |
| HTO54_RS00335 (pNDM-BJ03_58) | 55917..56174 | - | 258 | WP_004199355 | hypothetical protein | - |
| HTO54_RS00340 | 56171..56323 | - | 153 | WP_162542717 | hypothetical protein | - |
| HTO54_RS00345 (pNDM-BJ03_59) | 56410..56748 | - | 339 | WP_001099725 | hypothetical protein | - |
| HTO54_RS00350 (pNDM-BJ03_60) | 56842..57084 | - | 243 | WP_000008707 | hypothetical protein | - |
| HTO54_RS00355 (pNDM-BJ03_61) | 57074..57355 | - | 282 | WP_001348701 | hypothetical protein | - |