T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1571..28869
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIT20_RS25690 (CIT20_25525) | 129..563 | - | 435 | Protein_0 | CPBP family intramembrane glutamate endopeptidase | - |
| CIT20_RS25695 (CIT20_25530) | 643..1026 | + | 384 | WP_019725042 | DUF1496 domain-containing protein | - |
| CIT20_RS25700 (CIT20_25535) | 1131..1526 | + | 396 | WP_004187436 | lytic transglycosylase domain-containing protein | - |
| CIT20_RS25705 (CIT20_25540) | 1571..2833 | + | 1263 | WP_004206887 | hypothetical protein | trbA |
| CIT20_RS25710 (CIT20_25545) | 2844..3794 | + | 951 | WP_004206886 | DsbC family protein | trbB |
| CIT20_RS25715 (CIT20_25550) | 3807..5894 | + | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| CIT20_RS30525 | 5945..6040 | - | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| CIT20_RS25720 (CIT20_25555) | 7263..8318 | - | 1056 | WP_015060006 | plasmid replication initiator RepA | - |
| CIT20_RS25725 (CIT20_25560) | 8614..8856 | - | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |
| CIT20_RS25730 (CIT20_25565) | 8925..9578 | - | 654 | WP_015060005 | hypothetical protein | - |
| CIT20_RS25735 (CIT20_25570) | 9580..11775 | - | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| CIT20_RS25740 (CIT20_25575) | 11768..12364 | - | 597 | WP_015060003 | hypothetical protein | - |
| CIT20_RS25745 (CIT20_25580) | 12361..13569 | - | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| CIT20_RS25750 (CIT20_25585) | 13566..16616 | - | 3051 | WP_004187482 | hypothetical protein | traU |
| CIT20_RS25755 (CIT20_25590) | 16613..17107 | - | 495 | WP_004187480 | hypothetical protein | - |
| CIT20_RS25760 (CIT20_25595) | 17153..17542 | - | 390 | WP_004187479 | DUF6750 family protein | traR |
| CIT20_RS25765 (CIT20_25600) | 17559..18089 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| CIT20_RS25770 (CIT20_25605) | 18113..18817 | - | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| CIT20_RS25775 (CIT20_25610) | 18829..20178 | - | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| CIT20_RS25780 (CIT20_25615) | 20190..21341 | - | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| CIT20_RS25790 (CIT20_25620) | 21350..22063 | - | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| CIT20_RS25795 (CIT20_25625) | 22131..22541 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| CIT20_RS25800 (CIT20_25630) | 22528..22725 | + | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| CIT20_RS25805 (CIT20_25635) | 22726..23238 | - | 513 | WP_011091071 | hypothetical protein | traL |
| CIT20_RS30220 | 23204..26641 | - | 3438 | WP_015586048 | LPD7 domain-containing protein | - |
| CIT20_RS25815 (CIT20_25645) | 26666..26926 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| CIT20_RS25820 (CIT20_25650) | 26916..28079 | - | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| CIT20_RS25825 (CIT20_25655) | 28090..28869 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| CIT20_RS25830 (CIT20_25660) | 28866..29366 | - | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| CIT20_RS25835 (CIT20_25665) | 29380..31359 | - | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| CIT20_RS30225 | 31346..31873 | - | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| CIT20_RS25845 (CIT20_25675) | 31908..32303 | + | 396 | WP_019725163 | hypothetical protein | - |
| CIT20_RS25850 (CIT20_25680) | 32805..33341 | - | 537 | WP_004187332 | hypothetical protein | - |
| CIT20_RS25855 (CIT20_25685) | 33474..33785 | - | 312 | WP_004187333 | hypothetical protein | - |