T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 26389..55001
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIT20_RS23730 (CIT20_23580) | 21545..21862 | + | 318 | WP_014343505 | hypothetical protein | - |
| CIT20_RS23740 (CIT20_23585) | 22703..23059 | + | 357 | WP_014343501 | hypothetical protein | - |
| CIT20_RS23745 (CIT20_23590) | 23120..23332 | + | 213 | WP_014343500 | hypothetical protein | - |
| CIT20_RS23750 (CIT20_23595) | 23343..23567 | + | 225 | WP_014343499 | hypothetical protein | - |
| CIT20_RS23755 (CIT20_23600) | 23648..23968 | + | 321 | WP_014343498 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CIT20_RS23760 (CIT20_23605) | 23958..24236 | + | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| CIT20_RS30195 (CIT20_23610) | 24240..24344 | + | 105 | Protein_37 | transcriptional regulator | - |
| CIT20_RS23785 (CIT20_23630) | 25173..25994 | + | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| CIT20_RS23790 (CIT20_23635) | 26027..26356 | + | 330 | WP_013214015 | DUF5983 family protein | - |
| CIT20_RS23795 (CIT20_23640) | 26389..26874 | - | 486 | WP_014343495 | transglycosylase SLT domain-containing protein | virB1 |
| CIT20_RS23800 (CIT20_23645) | 27265..27681 | + | 417 | WP_014343494 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CIT20_RS23805 (CIT20_23650) | 27881..28618 | + | 738 | WP_013214018 | conjugal transfer protein TrbJ | - |
| CIT20_RS23810 (CIT20_23655) | 28733..28939 | + | 207 | WP_171773970 | TraY domain-containing protein | - |
| CIT20_RS23815 (CIT20_23660) | 29001..29369 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| CIT20_RS23820 (CIT20_23665) | 29383..29688 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| CIT20_RS23825 (CIT20_23670) | 29708..30274 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| CIT20_RS23830 (CIT20_23675) | 30261..31001 | + | 741 | WP_013214019 | type-F conjugative transfer system secretin TraK | traK |
| CIT20_RS23835 (CIT20_23680) | 31001..32425 | + | 1425 | WP_013214020 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CIT20_RS23840 (CIT20_23685) | 32497..33081 | + | 585 | WP_014343493 | type IV conjugative transfer system lipoprotein TraV | traV |
| CIT20_RS23845 (CIT20_23690) | 33404..33622 | + | 219 | WP_004195468 | hypothetical protein | - |
| CIT20_RS23850 (CIT20_23695) | 33623..33934 | + | 312 | WP_013214022 | hypothetical protein | - |
| CIT20_RS23855 (CIT20_23700) | 34001..34405 | + | 405 | WP_004197817 | hypothetical protein | - |
| CIT20_RS23870 (CIT20_23715) | 34782..35180 | + | 399 | WP_014343490 | hypothetical protein | - |
| CIT20_RS23875 (CIT20_23720) | 35252..37891 | + | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| CIT20_RS23880 (CIT20_23725) | 37891..38280 | + | 390 | WP_013214025 | type-F conjugative transfer system protein TrbI | - |
| CIT20_RS23885 (CIT20_23730) | 38280..38915 | + | 636 | WP_013214026 | type-F conjugative transfer system protein TraW | traW |
| CIT20_RS23890 (CIT20_23735) | 38950..39351 | + | 402 | WP_004194979 | hypothetical protein | - |
| CIT20_RS23895 (CIT20_23740) | 39348..40337 | + | 990 | WP_013214027 | conjugal transfer pilus assembly protein TraU | traU |
| CIT20_RS23900 (CIT20_23745) | 40350..40988 | + | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CIT20_RS23905 (CIT20_23750) | 41047..43002 | + | 1956 | WP_014343489 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CIT20_RS23910 (CIT20_23755) | 43034..43288 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| CIT20_RS23915 (CIT20_23760) | 43266..43514 | + | 249 | WP_013214029 | hypothetical protein | - |
| CIT20_RS23920 (CIT20_23765) | 43527..43853 | + | 327 | WP_013214030 | hypothetical protein | - |
| CIT20_RS23925 (CIT20_23770) | 43874..44626 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CIT20_RS23930 (CIT20_23775) | 44637..44876 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CIT20_RS23935 (CIT20_23780) | 44848..45405 | + | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CIT20_RS23940 (CIT20_23785) | 45451..45894 | + | 444 | WP_013214032 | F-type conjugal transfer protein TrbF | - |
| CIT20_RS23945 (CIT20_23790) | 45872..47251 | + | 1380 | WP_074160414 | conjugal transfer pilus assembly protein TraH | traH |
| CIT20_RS23950 (CIT20_23795) | 47251..50073 | + | 2823 | WP_013214034 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CIT20_RS23955 (CIT20_23800) | 50096..50698 | + | 603 | WP_013214035 | conjugal transfer protein TraS | - |
| CIT20_RS23960 (CIT20_23805) | 50949..51680 | + | 732 | WP_013214036 | conjugal transfer complement resistance protein TraT | - |
| CIT20_RS29885 | 51873..52562 | + | 690 | WP_014343485 | hypothetical protein | - |
| CIT20_RS23970 (CIT20_23815) | 52689..55001 | + | 2313 | WP_013214038 | type IV conjugative transfer system coupling protein TraD | virb4 |