T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3778..12985
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GEO46_RS22625 (GEO46_22625) | 1..876 | + | 876 | WP_000594612 | RepB family plasmid replication initiator protein | - |
| GEO46_RS22635 (GEO46_22635) | 2025..2378 | + | 354 | WP_000423602 | hypothetical protein | - |
| GEO46_RS22640 (GEO46_22640) | 2467..3579 | + | 1113 | WP_001300563 | IS4-like element IS421 family transposase | - |
| GEO46_RS22645 (GEO46_22645) | 3778..4095 | + | 318 | WP_000043357 | type IV conjugative transfer system protein TraL | traL |
| GEO46_RS22650 (GEO46_22650) | 4107..4895 | + | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| GEO46_RS22655 (GEO46_22655) | 4895..6166 | + | 1272 | WP_000592090 | type-F conjugative transfer system secretin TraK | traK |
| GEO46_RS22660 (GEO46_22660) | 6168..6629 | + | 462 | WP_000521240 | plasmid transfer protein HtdO | - |
| GEO46_RS22665 (GEO46_22665) | 6619..7974 | + | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| GEO46_RS22670 (GEO46_22670) | 7982..8464 | + | 483 | WP_000377633 | hypothetical protein | - |
| GEO46_RS22675 (GEO46_22675) | 8583..9335 | + | 753 | WP_183079335 | protein-disulfide isomerase HtdT | - |
| GEO46_RS22680 (GEO46_22680) | 9345..10295 | + | 951 | WP_001022587 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| GEO46_RS22685 (GEO46_22685) | 10304..12985 | + | 2682 | WP_000387412 | TraC family protein | virb4 |