T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2380..29494
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CK487_RS27790 (CK487_27785) | 36..401 | - | 366 | WP_020277900 | type II toxin-antitoxin system toxin endoribonuclease PemK-mt | - |
| CK487_RS29390 | 370..627 | - | 258 | WP_004187429 | type II toxin-antitoxin system antitoxin PemI | - |
| CK487_RS27795 (CK487_27790) | 719..1372 | - | 654 | WP_004206890 | type II CAAX endopeptidase family protein | - |
| CK487_RS27800 (CK487_27795) | 1452..1835 | + | 384 | WP_004206889 | DUF1496 domain-containing protein | - |
| CK487_RS27805 (CK487_27800) | 1940..2335 | + | 396 | WP_004187436 | lytic transglycosylase domain-containing protein | - |
| CK487_RS27810 (CK487_27805) | 2380..3642 | + | 1263 | WP_004206887 | hypothetical protein | trbA |
| CK487_RS27815 (CK487_27810) | 3653..4603 | + | 951 | WP_004206886 | DsbC family protein | trbB |
| CK487_RS27820 (CK487_27815) | 4616..6703 | + | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| CK487_RS30605 | 6754..6849 | - | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| CK487_RS27825 (CK487_27820) | 8076..9143 | - | 1068 | WP_024190316 | plasmid replication initiator RepA | - |
| CK487_RS27830 (CK487_27825) | 9428..9658 | - | 231 | WP_004187496 | IncL/M type plasmid replication protein RepC | - |
| CK487_RS27835 (CK487_27830) | 9732..10385 | - | 654 | WP_004206935 | hypothetical protein | - |
| CK487_RS27840 (CK487_27835) | 10388..12568 | - | 2181 | WP_004187492 | DotA/TraY family protein | traY |
| CK487_RS27845 (CK487_27840) | 12561..13211 | - | 651 | WP_004187488 | hypothetical protein | - |
| CK487_RS27850 (CK487_27845) | 13208..14416 | - | 1209 | WP_004187486 | conjugal transfer protein TraW | traW |
| CK487_RS27855 (CK487_27850) | 14413..17463 | - | 3051 | WP_011154474 | conjugative transfer protein | traU |
| CK487_RS27860 (CK487_27855) | 17460..17954 | - | 495 | WP_004187480 | hypothetical protein | - |
| CK487_RS27865 (CK487_27860) | 18000..18389 | - | 390 | WP_011154472 | DUF6750 family protein | traR |
| CK487_RS27870 (CK487_27865) | 18406..18936 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| CK487_RS27875 (CK487_27870) | 18960..19664 | - | 705 | WP_004206933 | conjugal transfer protein TraP | traP |
| CK487_RS27880 (CK487_27875) | 19676..21025 | - | 1350 | WP_004206932 | conjugal transfer protein TraO | traO |
| CK487_RS27885 (CK487_27880) | 21037..22188 | - | 1152 | WP_015062843 | DotH/IcmK family type IV secretion protein | traN |
| CK487_RS27890 (CK487_27885) | 22197..22910 | - | 714 | WP_223294958 | DotI/IcmL family type IV secretion protein | traM |
| CK487_RS27895 (CK487_27890) | 22978..23388 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| CK487_RS27900 (CK487_27895) | 23375..23572 | + | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| CK487_RS27905 (CK487_27900) | 23573..24085 | - | 513 | WP_011091071 | hypothetical protein | traL |
| CK487_RS30455 | 24051..27266 | - | 3216 | WP_221178076 | LPD7 domain-containing protein | - |
| CK487_RS27915 (CK487_27910) | 27291..27551 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| CK487_RS27920 (CK487_27915) | 27541..28704 | - | 1164 | WP_004206926 | plasmid transfer ATPase TraJ | virB11 |
| CK487_RS27925 (CK487_27920) | 28715..29494 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| CK487_RS27930 (CK487_27925) | 29491..29991 | - | 501 | WP_004206925 | DotD/TraH family lipoprotein | - |
| CK487_RS27935 (CK487_27930) | 30005..31984 | - | 1980 | WP_004206924 | TraI/MobA(P) family conjugative relaxase | - |
| CK487_RS27940 (CK487_27935) | 31971..32288 | - | 318 | WP_004206923 | plasmid mobilization protein MobA | - |
| CK487_RS27945 (CK487_27940) | 32567..32932 | + | 366 | WP_004206922 | hypothetical protein | - |
| CK487_RS27950 (CK487_27945) | 33433..33969 | - | 537 | WP_004206920 | hypothetical protein | - |
| CK487_RS27955 (CK487_27950) | 34102..34413 | - | 312 | WP_004187333 | hypothetical protein | - |