T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 25492..36713
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKJ16_RS00115 (pSK41_p21) | 21240..21644 | - | 405 | WP_001242578 | bleomycin binding protein | - |
| HKJ16_RS00120 (pSK41_p22) | 21861..22631 | - | 771 | WP_001795128 | aminoglycoside O-nucleotidyltransferase ANT(4')-Ia | - |
| HKJ16_RS00125 | 22791..22937 | - | 147 | WP_001817822 | hypothetical protein | - |
| HKJ16_RS00130 (pSK41_p23) | 22981..23655 | + | 675 | WP_001106019 | IS6-like element IS257 family transposase | - |
| HKJ16_RS00135 (pSK41_p24) | 23764..23952 | - | 189 | WP_001063224 | hypothetical protein | - |
| HKJ16_RS00140 (pSK41_p25) | 24124..25098 | + | 975 | WP_000368849 | conjugative transfer protein TrsA | - |
| HKJ16_RS00145 (pSK41_p26) | 25115..25432 | + | 318 | WP_000591622 | CagC family type IV secretion system protein | - |
| HKJ16_RS00150 (pSK41_p27) | 25492..25899 | + | 408 | WP_000110157 | hypothetical protein | trsC |
| HKJ16_RS00155 (pSK41_p28) | 25886..26569 | + | 684 | WP_000979860 | TrsD/TraD family conjugative transfer protein | trsD |
| HKJ16_RS00160 (pSK41_p29) | 26584..28602 | + | 2019 | WP_001795400 | DUF87 domain-containing protein | virb4 |
| HKJ16_RS00165 (pSK41_p30) | 28614..29894 | + | 1281 | WP_000702361 | membrane protein | trsF |
| HKJ16_RS00170 (pSK41_p31) | 29912..30988 | + | 1077 | WP_000269385 | CHAP domain-containing protein | trsG |
| HKJ16_RS00175 (pSK41_p32) | 30998..31483 | + | 486 | WP_000735569 | TrsH/TraH family protein | - |
| HKJ16_RS00180 (pSK41_p33) | 31499..33601 | + | 2103 | WP_001094109 | DNA topoisomerase III | - |
| HKJ16_RS00185 (pSK41_p34) | 33617..34081 | + | 465 | WP_000715273 | hypothetical protein | trsJ |
| HKJ16_RS00190 (pSK41_p35) | 34078..35718 | + | 1641 | WP_000209436 | VirD4-like conjugal transfer protein, CD1115 family | - |
| HKJ16_RS00195 (pSK41_p36) | 35796..36713 | + | 918 | WP_011117679 | conjugal transfer protein TrbL family protein | trsL |
| HKJ16_RS00200 (pSK41_p37) | 36730..37122 | + | 393 | WP_000608970 | single-stranded DNA-binding protein | - |
| HKJ16_RS00205 (pSK41_p38) | 37179..37346 | + | 168 | WP_000869301 | hypothetical protein | - |
| HKJ16_RS00210 (pSK41_p39) | 37384..38058 | + | 675 | WP_011117680 | IS6-like element IS257 family transposase | - |
| HKJ16_RS00215 (pSK41_p40) | 38162..39085 | + | 924 | WP_001579520 | protein rep | - |
| HKJ16_RS00220 | 39616..39837 | - | 222 | WP_000799767 | hypothetical protein | - |
| HKJ16_RS00225 (pSK41_p41) | 40055..40378 | - | 324 | WP_001146389 | quaternary ammonium compound efflux SMR transporter QacC | - |
| HKJ16_RS00230 | 40686..40916 | + | 231 | WP_000956386 | hypothetical protein | - |
| HKJ16_RS00235 (pSK41_p42) | 40946..41620 | + | 675 | WP_001105984 | IS6-like element IS257 family transposase | - |