T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 54455..97567
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NH235_RS00325 | 52171..54462 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| NH235_RS00330 | 54455..55525 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| NH235_RS00335 | 55544..56752 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| NH235_RS00340 | 57044..57196 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| NH235_RS00345 | 57342..58139 | - | 798 | WP_000544828 | IS21-like element IS21 family helper ATPase IstB | - |
| NH235_RS00350 | 58139..59311 | - | 1173 | WP_000952382 | IS21-like element IS21 family transposase | - |
| NH235_RS00355 | 59393..59653 | - | 261 | WP_159381058 | hypothetical protein | - |
| NH235_RS00610 | 60152..60247 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| NH235_RS00365 | 60312..60596 | - | 285 | WP_031942457 | hypothetical protein | - |
| NH235_RS00370 | 60880..61089 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| NH235_RS00375 | 61161..61835 | - | 675 | WP_223866377 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NH235_RS00380 | 61885..64053 | - | 2169 | WP_021537350 | DotA/TraY family protein | traY |
| NH235_RS00385 | 64150..64734 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| NH235_RS00390 | 64763..65965 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| NH235_RS00395 | 65932..66546 | - | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| NH235_RS00400 | 66546..69590 | - | 3045 | WP_021265678 | IncI1-type conjugal transfer protein TraU | traU |
| NH235_RS00405 | 69680..70480 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| NH235_RS00410 | 70464..70652 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| NH235_RS00415 | 70716..71120 | - | 405 | WP_000086958 | IncI1-type conjugal transfer protein TraR | traR |
| NH235_RS00420 | 71171..71698 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NH235_RS00425 | 71698..72402 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| NH235_RS00430 | 72402..73691 | - | 1290 | WP_001272003 | conjugal transfer protein TraO | traO |
| NH235_RS00435 | 73694..74677 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| NH235_RS00440 | 74688..75380 | - | 693 | WP_000138550 | DotI/IcmL family type IV secretion protein | traM |
| NH235_RS00445 | 75377..75724 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| NH235_RS00450 | 75742..79509 | - | 3768 | WP_001141527 | LPD7 domain-containing protein | - |
| NH235_RS00455 | 79598..80149 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| NH235_RS00460 | 80164..80454 | - | 291 | WP_001299214 | hypothetical protein | traK |
| NH235_RS00465 | 80451..81599 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| NH235_RS00470 | 81596..82414 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NH235_RS00475 | 82411..82869 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NH235_RS00480 | 83264..83848 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| NH235_RS00485 | 83908..85110 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| NH235_RS00490 | 85195..86019 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| NH235_RS00495 | 86170..87324 | - | 1155 | WP_001139957 | tyrosine-type recombinase/integrase | - |
| NH235_RS00500 | 87642..87851 | - | 210 | Protein_101 | hypothetical protein | - |
| NH235_RS00505 | 87851..88195 | + | 345 | Protein_102 | WbuC family cupin fold metalloprotein | - |
| NH235_RS00510 | 88242..89117 | - | 876 | WP_013188473 | extended-spectrum class A beta-lactamase CTX-M-1 | - |
| NH235_RS00515 | 89405..90667 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| NH235_RS00520 | 91769..93061 | - | 1293 | WP_001417545 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NH235_RS00525 | 93061..93717 | - | 657 | WP_001193553 | prepilin peptidase | - |
| NH235_RS00530 | 93702..94262 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| NH235_RS00535 | 94272..94886 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| NH235_RS00540 | 94904..96001 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| NH235_RS00545 | 96014..97567 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| NH235_RS00550 | 97578..98030 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| NH235_RS00555 | 98017..99312 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| NH235_RS00560 | 99305..100987 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| NH235_RS00565 | 101001..101438 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| NH235_RS00570 | 101438..102505 | - | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |