T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 55905..101260
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPI88_RS00360 | 52395..52826 | + | 432 | WP_001335086 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| HPI88_RS00690 | 52924..53073 | - | 150 | WP_001536674 | hypothetical protein | - |
| HPI88_RS00370 | 53621..55924 | - | 2304 | WP_000077664 | F-type conjugative transfer protein TrbC | - |
| HPI88_RS00375 | 55905..57029 | - | 1125 | WP_000152387 | DsbC family protein | trbB |
| HPI88_RS00380 | 57026..58333 | - | 1308 | WP_021577249 | IncI1-type conjugal transfer protein TrbA | trbA |
| HPI88_RS00695 | 59130..59225 | + | 96 | WP_001363141 | DinQ-like type I toxin DqlB | - |
| HPI88_RS00390 | 59288..59464 | - | 177 | WP_001054907 | hypothetical protein | - |
| HPI88_RS00395 | 59614..60081 | - | 468 | WP_000598962 | thermonuclease family protein | - |
| HPI88_RS00400 | 60240..60863 | + | 624 | WP_001155247 | helix-turn-helix domain-containing protein | - |
| HPI88_RS00405 | 61061..61276 | - | 216 | WP_000266543 | hypothetical protein | - |
| HPI88_RS00410 | 61280..61648 | - | 369 | WP_001345852 | hypothetical protein | - |
| HPI88_RS00415 | 61660..61851 | - | 192 | WP_000751583 | hypothetical protein | - |
| HPI88_RS00420 | 61939..62181 | - | 243 | WP_000650923 | hypothetical protein | - |
| HPI88_RS00425 | 62511..62663 | + | 153 | WP_001335079 | Hok/Gef family protein | - |
| HPI88_RS00430 | 62801..64387 | - | 1587 | WP_000004564 | TnsA endonuclease N-terminal domain-containing protein | - |
| HPI88_RS00435 | 64661..65308 | - | 648 | WP_015056434 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HPI88_RS00440 | 65396..67555 | - | 2160 | WP_000691811 | DotA/TraY family protein | traY |
| HPI88_RS00445 | 67630..68199 | - | 570 | WP_000650752 | conjugal transfer protein TraX | - |
| HPI88_RS00450 | 68196..69401 | - | 1206 | WP_001189548 | conjugal transfer protein TraW | traW |
| HPI88_RS00455 | 69359..69979 | - | 621 | WP_000286854 | hypothetical protein | traV |
| HPI88_RS00460 | 69979..73023 | - | 3045 | WP_001024766 | conjugal transfer protein | traU |
| HPI88_RS00465 | 73089..73325 | + | 237 | WP_005082508 | hypothetical protein | - |
| HPI88_RS00470 | 73318..74136 | - | 819 | WP_000753550 | hypothetical protein | traT |
| HPI88_RS00700 | 74051..74335 | - | 285 | WP_001353683 | hypothetical protein | - |
| HPI88_RS00480 | 74359..74757 | - | 399 | WP_000088813 | DUF6750 family protein | traR |
| HPI88_RS00485 | 74804..75334 | - | 531 | WP_000987023 | conjugal transfer protein TraQ | traQ |
| HPI88_RS00490 | 75331..76044 | - | 714 | WP_000787003 | conjugal transfer protein TraP | traP |
| HPI88_RS00495 | 76041..77378 | - | 1338 | WP_013307873 | conjugal transfer protein TraO | traO |
| HPI88_RS00500 | 77382..78356 | - | 975 | WP_000547383 | DotH/IcmK family type IV secretion protein | traN |
| HPI88_RS00505 | 78367..79062 | - | 696 | WP_001681668 | DotI/IcmL family type IV secretion protein | traM |
| HPI88_RS00510 | 79074..79424 | - | 351 | WP_001056367 | hypothetical protein | traL |
| HPI88_RS00515 | 79441..83502 | - | 4062 | WP_013307874 | LPD7 domain-containing protein | - |
| HPI88_RS00520 | 83856..84437 | - | 582 | WP_025750394 | hypothetical protein | - |
| HPI88_RS00525 | 84445..84900 | - | 456 | Protein_102 | IS5 family transposase | - |
| HPI88_RS00530 | 84935..85810 | - | 876 | WP_001617865 | extended-spectrum class A beta-lactamase CTX-M-14 | - |
| HPI88_RS00540 | 86060..87322 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HPI88_RS00545 | 87734..88024 | - | 291 | WP_000817801 | IcmT/TraK family protein | traK |
| HPI88_RS00550 | 88021..89169 | - | 1149 | WP_013307876 | plasmid transfer ATPase TraJ | virB11 |
| HPI88_RS00555 | 89153..89989 | - | 837 | WP_000745049 | type IV secretory system conjugative DNA transfer family protein | traI |
| HPI88_RS00560 | 89986..90444 | - | 459 | WP_025750398 | DotD/TraH family lipoprotein | - |
| HPI88_RS00565 | 90548..91750 | - | 1203 | WP_013307879 | conjugal transfer protein TraF | - |
| HPI88_RS00570 | 91852..92673 | - | 822 | WP_001681675 | hypothetical protein | traE |
| HPI88_RS00575 | 92886..94010 | - | 1125 | WP_013307880 | site-specific integrase | - |
| HPI88_RS00580 | 94060..94368 | + | 309 | WP_102166912 | pilus assembly protein | - |
| HPI88_RS00585 | 94663..95001 | + | 339 | WP_072106734 | prepilin, shufflon protein A | - |
| HPI88_RS00590 | 95006..95395 | - | 390 | Protein_114 | phage tail protein | - |
| HPI88_RS00595 | 95481..95636 | + | 156 | WP_001358489 | hypothetical protein | - |
| HPI88_RS00600 | 95633..96868 | - | 1236 | WP_032151497 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HPI88_RS00605 | 96886..97512 | - | 627 | WP_013307883 | prepilin peptidase | - |
| HPI88_RS00610 | 97528..98013 | - | 486 | WP_001080767 | lytic transglycosylase domain-containing protein | virB1 |
| HPI88_RS00615 | 98058..98594 | - | 537 | WP_000111521 | type 4 pilus major pilin | - |
| HPI88_RS00620 | 98656..99750 | - | 1095 | WP_032253914 | type II secretion system F family protein | - |
| HPI88_RS00625 | 99752..101260 | - | 1509 | WP_000880806 | GspE/PulE family protein | virB11 |
| HPI88_RS00630 | 101364..101822 | - | 459 | WP_000095886 | type IV pilus biogenesis protein PilP | - |
| HPI88_RS00635 | 101812..103107 | - | 1296 | WP_000129883 | type 4b pilus protein PilO2 | - |
| HPI88_RS00640 | 103128..104747 | - | 1620 | WP_001035562 | PilN family type IVB pilus formation outer membrane protein | - |
| HPI88_RS00645 | 104779..105192 | - | 414 | WP_124983997 | type IV pilus biogenesis protein PilM | - |