T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32955..56133
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX88_RS25130 (EGX88_25150) | 28708..29160 | + | 453 | WP_000101552 | CaiF/GrlA family transcriptional regulator | - |
| EGX88_RS25135 (EGX88_25155) | 29153..29368 | + | 216 | WP_001127357 | DUF1187 family protein | - |
| EGX88_RS25835 | 29361..29537 | + | 177 | WP_000753049 | hypothetical protein | - |
| EGX88_RS25140 (EGX88_25160) | 29564..30517 | + | 954 | WP_072089442 | SPFH domain-containing protein | - |
| EGX88_RS25150 (EGX88_25170) | 30891..31334 | + | 444 | WP_000964330 | NfeD family protein | - |
| EGX88_RS25840 | 31338..31508 | + | 171 | WP_000550720 | hypothetical protein | - |
| EGX88_RS25155 (EGX88_25175) | 31519..31980 | + | 462 | WP_001243166 | hypothetical protein | - |
| EGX88_RS25170 (EGX88_25190) | 32395..32697 | + | 303 | WP_084567655 | hypothetical protein | - |
| EGX88_RS25175 (EGX88_25195) | 32694..32951 | + | 258 | WP_000739144 | hypothetical protein | - |
| EGX88_RS25180 (EGX88_25200) | 32955..33950 | + | 996 | WP_001028543 | type IV secretion system protein | virB6 |
| EGX88_RS25185 (EGX88_25205) | 33956..34597 | + | 642 | WP_001425343 | type IV secretion system protein | - |
| EGX88_RS25190 (EGX88_25210) | 34599..34853 | + | 255 | WP_001043555 | EexN family lipoprotein | - |
| EGX88_RS25195 (EGX88_25215) | 34866..35153 | + | 288 | WP_001032611 | EexN family lipoprotein | - |
| EGX88_RS25200 (EGX88_25220) | 35226..35861 | + | 636 | WP_000835773 | hypothetical protein | - |
| EGX88_RS25205 (EGX88_25225) | 36033..36320 | + | 288 | WP_001326593 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| EGX88_RS25210 (EGX88_25230) | 36323..37558 | + | 1236 | WP_000733400 | toxin co-regulated pilus biosynthesis Q family protein | - |
| EGX88_RS25215 (EGX88_25235) | 37564..38001 | + | 438 | WP_000539666 | type IV pilus biogenesis protein PilM | - |
| EGX88_RS25220 (EGX88_25240) | 38341..38739 | + | 399 | WP_001153669 | hypothetical protein | - |
| EGX88_RS25225 (EGX88_25245) | 38760..39344 | + | 585 | WP_023223347 | lytic transglycosylase domain-containing protein | virB1 |
| EGX88_RS25850 | 39344..39634 | + | 291 | WP_000865478 | TrbC/VirB2 family protein | virB2 |
| EGX88_RS25235 (EGX88_25255) | 39705..40025 | + | 321 | WP_010895893 | VirB3 family type IV secretion system protein | virB3 |
| EGX88_RS25240 (EGX88_25260) | 40031..42388 | + | 2358 | WP_023223346 | VirB4 family type IV secretion system protein | virb4 |
| EGX88_RS25250 (EGX88_25270) | 42554..43288 | + | 735 | WP_000432283 | virB8 family protein | virB8 |
| EGX88_RS25255 (EGX88_25275) | 43354..44055 | + | 702 | WP_000274524 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| EGX88_RS25260 (EGX88_25280) | 44045..45184 | + | 1140 | WP_000790641 | TrbI/VirB10 family protein | virB10 |
| EGX88_RS25265 (EGX88_25285) | 45251..46306 | + | 1056 | WP_001059977 | P-type DNA transfer ATPase VirB11 | virB11 |
| EGX88_RS25270 (EGX88_25290) | 46322..48280 | + | 1959 | WP_134797162 | type IV secretory system conjugative DNA transfer family protein | - |
| EGX88_RS25275 (EGX88_25295) | 48327..48845 | + | 519 | WP_010895890 | sigma 54-interacting transcriptional regulator | virb4 |
| EGX88_RS25280 (EGX88_25300) | 48838..50481 | + | 1644 | WP_001035589 | PilN family type IVB pilus formation outer membrane protein | - |
| EGX88_RS25285 (EGX88_25305) | 50532..51842 | + | 1311 | WP_001454111 | type 4b pilus protein PilO2 | - |
| EGX88_RS25290 (EGX88_25310) | 51826..52320 | + | 495 | WP_000912553 | type IV pilus biogenesis protein PilP | - |
| EGX88_RS25295 (EGX88_25315) | 52345..53883 | + | 1539 | WP_000466225 | GspE/PulE family protein | virB11 |
| EGX88_RS25300 (EGX88_25320) | 53874..54983 | + | 1110 | WP_000974903 | type II secretion system F family protein | - |
| EGX88_RS25305 (EGX88_25325) | 55028..55585 | + | 558 | WP_000095048 | type 4 pilus major pilin | - |
| EGX88_RS25310 (EGX88_25330) | 55651..56133 | + | 483 | WP_001258095 | lytic transglycosylase domain-containing protein | virB1 |
| EGX88_RS25315 (EGX88_25335) | 56137..56772 | + | 636 | WP_000934979 | A24 family peptidase | - |
| EGX88_RS25320 (EGX88_25340) | 56785..57818 | + | 1034 | WP_000750512 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |