T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 15562..25838
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCT50_RS23675 (OCT50_23665) | 11568..12197 | + | 630 | WP_064754415 | hypothetical protein | - |
| OCT50_RS23680 (OCT50_23670) | 12284..12478 | + | 195 | WP_050136673 | hypothetical protein | - |
| OCT50_RS23685 (OCT50_23675) | 12550..12882 | + | 333 | WP_045723726 | hypothetical protein | - |
| OCT50_RS23690 (OCT50_23680) | 13069..13677 | + | 609 | WP_000275218 | recombinase family protein | - |
| OCT50_RS23695 (OCT50_23685) | 13674..13859 | - | 186 | WP_024562121 | ribbon-helix-helix domain-containing protein | - |
| OCT50_RS23700 (OCT50_23690) | 14144..14452 | - | 309 | WP_000733764 | hypothetical protein | - |
| OCT50_RS23705 (OCT50_23695) | 14456..14794 | - | 339 | WP_032493175 | hypothetical protein | - |
| OCT50_RS23710 (OCT50_23700) | 14791..15141 | - | 351 | WP_024562120 | hypothetical protein | - |
| OCT50_RS23715 (OCT50_23705) | 15145..15342 | - | 198 | WP_001642194 | H-NS family nucleoid-associated regulatory protein | - |
| OCT50_RS23720 (OCT50_23710) | 15343..15462 | - | 120 | Protein_27 | H-NS histone family protein | - |
| OCT50_RS23725 (OCT50_23715) | 15562..16344 | + | 783 | WP_024562119 | lytic transglycosylase domain-containing protein | virB1 |
| OCT50_RS23730 (OCT50_23720) | 16591..16887 | + | 297 | WP_015060075 | TrbC/VirB2 family protein | virB2 |
| OCT50_RS23735 (OCT50_23725) | 16927..17244 | + | 318 | WP_000462629 | type IV secretion system protein VirB3 | virB3 |
| OCT50_RS23740 (OCT50_23730) | 17245..19818 | + | 2574 | WP_032493176 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| OCT50_RS23745 (OCT50_23735) | 19834..20535 | + | 702 | WP_014014949 | type IV secretion system protein | virB5 |
| OCT50_RS23750 (OCT50_23740) | 20545..20787 | + | 243 | WP_000858958 | EexN family lipoprotein | - |
| OCT50_RS23755 (OCT50_23745) | 20804..21841 | + | 1038 | WP_014014948 | type IV secretion system protein | virB6 |
| OCT50_RS24200 | 21918..22049 | + | 132 | WP_032493177 | hypothetical protein | - |
| OCT50_RS23760 (OCT50_23750) | 22060..22755 | + | 696 | WP_001208352 | type IV secretion system protein | virB8 |
| OCT50_RS23765 (OCT50_23755) | 22766..23653 | + | 888 | WP_000758230 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| OCT50_RS23770 (OCT50_23760) | 23653..24786 | + | 1134 | WP_000101920 | type IV secretion system protein VirB10 | virB10 |
| OCT50_RS23775 (OCT50_23765) | 24837..25838 | + | 1002 | WP_001076634 | ATPase, T2SS/T4P/T4SS family | virB11 |
| OCT50_RS23780 (OCT50_23770) | 25835..26155 | + | 321 | Protein_40 | phospholipase D-like domain-containing protein | - |
| OCT50_RS23785 (OCT50_23775) | 26155..26220 | + | 66 | Protein_41 | EAL domain-containing protein | - |
| OCT50_RS23790 (OCT50_23780) | 26295..27974 | + | 1680 | WP_000179844 | Mu transposase C-terminal domain-containing protein | - |
| OCT50_RS23795 (OCT50_23785) | 27977..28885 | + | 909 | WP_003155746 | TniB family NTP-binding protein | - |
| OCT50_RS23800 (OCT50_23790) | 28882..30099 | + | 1218 | WP_006122485 | TniQ family protein | - |
| OCT50_RS23805 (OCT50_23795) | 30161..30784 | + | 624 | WP_003155741 | recombinase family protein | - |