T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 192343..228485
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NH400_RS00920 | 187405..188472 | + | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |
| NH400_RS00925 | 188472..188909 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| NH400_RS00930 | 188923..190605 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| NH400_RS00935 | 190598..191893 | + | 1296 | WP_001545757 | type 4b pilus protein PilO2 | - |
| NH400_RS00940 | 191880..192332 | + | 453 | WP_001247331 | type IV pilus biogenesis protein PilP | - |
| NH400_RS00945 | 192343..193896 | + | 1554 | WP_000362206 | GspE/PulE family protein | virB11 |
| NH400_RS00950 | 193909..194994 | + | 1086 | WP_001208802 | type II secretion system F family protein | - |
| NH400_RS00955 | 195011..195625 | + | 615 | WP_000908226 | type 4 pilus major pilin | - |
| NH400_RS00960 | 195635..196195 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| NH400_RS00965 | 196180..196836 | + | 657 | WP_001193549 | A24 family peptidase | - |
| NH400_RS00970 | 196836..198128 | + | 1293 | WP_001350014 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NH400_RS00975 | 198184..198309 | - | 126 | Protein_202 | RNA-guided endonuclease TnpB family protein | - |
| NH400_RS00980 | 198517..199341 | + | 825 | WP_001238942 | conjugal transfer protein TraE | traE |
| NH400_RS00985 | 199427..200629 | + | 1203 | WP_000976348 | conjugal transfer protein TraF | - |
| NH400_RS00990 | 200689..201273 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| NH400_RS00995 | 201668..202126 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NH400_RS01000 | 202123..202941 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NH400_RS01005 | 202938..204086 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| NH400_RS01010 | 204083..204373 | + | 291 | WP_001299214 | hypothetical protein | traK |
| NH400_RS01015 | 204388..204939 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| NH400_RS01020 | 205029..208796 | + | 3768 | WP_001141542 | LPD7 domain-containing protein | - |
| NH400_RS01025 | 208814..209161 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| NH400_RS01030 | 209158..209850 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| NH400_RS01035 | 209861..210844 | + | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| NH400_RS01040 | 210847..212136 | + | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| NH400_RS01045 | 212136..212840 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| NH400_RS01050 | 212840..213367 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NH400_RS01055 | 213418..213822 | + | 405 | WP_000086961 | IncI1-type conjugal transfer protein TraR | traR |
| NH400_RS01060 | 213886..214074 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| NH400_RS01065 | 214058..214858 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| NH400_RS01070 | 214948..217992 | + | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| NH400_RS01075 | 217992..218606 | + | 615 | WP_000337400 | IncI1-type conjugal transfer protein TraV | traV |
| NH400_RS01080 | 218573..219775 | + | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| NH400_RS01085 | 219804..220388 | + | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| NH400_RS01090 | 220485..222653 | + | 2169 | WP_000698357 | DotA/TraY family protein | traY |
| NH400_RS01095 | 222727..223377 | + | 651 | WP_001178506 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NH400_RS01100 | 223449..223658 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| NH400_RS01105 | 224050..224226 | + | 177 | WP_001054904 | hypothetical protein | - |
| NH400_RS01495 | 224291..224386 | - | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| NH400_RS01110 | 225018..225926 | + | 909 | WP_000055084 | hypothetical protein | - |
| NH400_RS01115 | 226188..227396 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| NH400_RS01120 | 227415..228485 | + | 1071 | WP_000151577 | IncI1-type conjugal transfer protein TrbB | trbB |
| NH400_RS01125 | 228478..230769 | + | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |