T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48779..90976
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QR684_RS23365 (QR684_23365) | 46495..48786 | - | 2292 | WP_001289271 | F-type conjugative transfer protein TrbC | - |
| QR684_RS23370 (QR684_23370) | 48779..49849 | - | 1071 | WP_000151575 | IncI1-type conjugal transfer protein TrbB | trbB |
| QR684_RS23375 (QR684_23375) | 49868..51076 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| QR684_RS23380 (QR684_23380) | 51368..51520 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| QR684_RS23385 (QR684_23385) | 51592..51843 | - | 252 | WP_001291965 | hypothetical protein | - |
| QR684_RS23390 (QR684_23390) | 52204..52986 | - | 783 | WP_001300609 | IS21-like element IS100kyp family helper ATPase IstB | - |
| QR684_RS23395 (QR684_23395) | 52983..54005 | - | 1023 | WP_001572805 | IS21-like element IS100 family transposase | - |
| QR684_RS23400 (QR684_23400) | 54726..54902 | - | 177 | WP_001054900 | hypothetical protein | - |
| QR684_RS23405 (QR684_23405) | 55294..55503 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| QR684_RS23410 (QR684_23410) | 55575..56237 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QR684_RS23415 (QR684_23415) | 56308..58476 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| QR684_RS23420 (QR684_23420) | 58573..59157 | - | 585 | WP_001037998 | conjugal transfer protein TraX | - |
| QR684_RS23425 (QR684_23425) | 59186..60388 | - | 1203 | WP_001189158 | IncI1-type conjugal transfer protein TraW | traW |
| QR684_RS23430 (QR684_23430) | 60355..60969 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| QR684_RS23435 (QR684_23435) | 60969..64013 | - | 3045 | WP_046340721 | IncI1-type conjugal transfer protein TraU | traU |
| QR684_RS23440 (QR684_23440) | 64103..64903 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| QR684_RS23445 (QR684_23445) | 64887..65075 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| QR684_RS23450 (QR684_23450) | 65139..65543 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| QR684_RS23455 (QR684_23455) | 65594..66121 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| QR684_RS23460 (QR684_23460) | 66121..66825 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| QR684_RS23465 (QR684_23465) | 66825..68114 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| QR684_RS23470 (QR684_23470) | 68117..69100 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| QR684_RS23475 (QR684_23475) | 69111..69803 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| QR684_RS23480 (QR684_23480) | 69800..70147 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| QR684_RS23485 (QR684_23485) | 70165..73932 | - | 3768 | WP_001141535 | LPD7 domain-containing protein | - |
| QR684_RS23945 | 74022..74105 | - | 84 | Protein_83 | phospholipase D family protein | - |
| QR684_RS23490 (QR684_23490) | 74186..74611 | + | 426 | WP_021514830 | transposase | - |
| QR684_RS23495 (QR684_23495) | 74608..74958 | + | 351 | WP_000624718 | IS66 family insertion sequence element accessory protein TnpB | - |
| QR684_RS23500 (QR684_23500) | 74989..76581 | + | 1593 | WP_021514829 | IS66 family transposase | - |
| QR684_RS23505 (QR684_23505) | 76568..77092 | - | 525 | WP_046340722 | phospholipase D family protein | - |
| QR684_RS23510 (QR684_23510) | 77107..77397 | - | 291 | WP_001299214 | hypothetical protein | traK |
| QR684_RS23515 (QR684_23515) | 77394..78542 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| QR684_RS23520 (QR684_23520) | 78539..79357 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| QR684_RS23525 (QR684_23525) | 79354..79812 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| QR684_RS23530 (QR684_23530) | 80207..80791 | - | 585 | WP_000977517 | histidine phosphatase family protein | - |
| QR684_RS23535 (QR684_23535) | 80851..82053 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| QR684_RS23540 (QR684_23540) | 82139..82963 | - | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
| QR684_RS23545 (QR684_23545) | 83114..84268 | - | 1155 | WP_001139958 | tyrosine-type recombinase/integrase | - |
| QR684_RS23550 (QR684_23550) | 85049..86470 | - | 1422 | WP_289211204 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| QR684_RS23555 (QR684_23555) | 86470..87126 | - | 657 | WP_001193553 | prepilin peptidase | - |
| QR684_RS23560 (QR684_23560) | 87111..87671 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| QR684_RS23565 (QR684_23565) | 87681..88295 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| QR684_RS23570 (QR684_23570) | 88313..89410 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| QR684_RS23575 (QR684_23575) | 89423..90976 | - | 1554 | WP_046340687 | GspE/PulE family protein | virB11 |
| QR684_RS23580 (QR684_23580) | 90987..91439 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| QR684_RS23585 (QR684_23585) | 91426..92721 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| QR684_RS23590 (QR684_23590) | 92714..94396 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| QR684_RS23595 (QR684_23595) | 94410..94847 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| QR684_RS23600 (QR684_23600) | 94847..95914 | - | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |