T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 215320..224527
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFH28_RS25490 (NFH28_25490) | 215320..218001 | - | 2682 | WP_000387412 | TraC family protein | virb4 |
| NFH28_RS25495 (NFH28_25495) | 218010..218960 | - | 951 | WP_001022587 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| NFH28_RS25500 (NFH28_25500) | 218970..219722 | - | 753 | WP_183079335 | protein-disulfide isomerase HtdT | - |
| NFH28_RS25505 (NFH28_25505) | 219841..220323 | - | 483 | WP_000377633 | hypothetical protein | - |
| NFH28_RS25510 (NFH28_25510) | 220331..221686 | - | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| NFH28_RS25515 (NFH28_25515) | 221676..222137 | - | 462 | WP_000521240 | plasmid transfer protein HtdO | - |
| NFH28_RS25520 (NFH28_25520) | 222139..223410 | - | 1272 | WP_000592090 | type-F conjugative transfer system secretin TraK | traK |
| NFH28_RS25525 (NFH28_25525) | 223410..224198 | - | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| NFH28_RS25530 (NFH28_25530) | 224210..224527 | - | 318 | WP_000043357 | type IV conjugative transfer system protein TraL | traL |
| NFH28_RS25535 (NFH28_25535) | 224578..224931 | - | 354 | WP_000423602 | hypothetical protein | - |
| NFH28_RS25540 (NFH28_25540) | 226080..226955 | - | 876 | WP_000594612 | RepB family plasmid replication initiator protein | - |
| NFH28_RS25545 (NFH28_25545) | 227432..228487 | + | 1056 | WP_001065779 | hypothetical protein | - |
| NFH28_RS25550 (NFH28_25550) | 228505..228705 | + | 201 | WP_000594931 | hypothetical protein | - |
| NFH28_RS25555 (NFH28_25555) | 228702..229418 | + | 717 | WP_046788421 | zinc finger-like domain-containing protein | - |